Detail



ID : Ahg320279

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320279|fgenesh1_pm.C_scaffold_4000336
Sequence
ATGAGAAATG CGAAGCTTTT CTTTTGCTTC TTGCTCTTCT TCTCCTTCCG CTTGGAAATC GGCAGAGGAC AGAACAACGG CAAAACCCAA GTCAATGTCG GTGTTGTAAC AGATGTCGGT ACTTCACACT CGGAGGTTTC CATGCTCTGT ATCAACATGT CTCTTACTGA TTTCTACTCT TCTCGTCCCC AGTTTCAGAC AAGGCTTGTC GTCAACGTTG GTGACTCCAA AAATGACGTT GTTGGTGCCG CAACTGCAGC TATTGAGTTG ATAAAGAACA AGCAAGTGAA AGCGATTTTG GGCCCATGGA CATCTATGCA AGCTCATTTC TTGATCGAGA TTGGCCAAAA ATCTCGGGTT CCTGTTGTTT CCTATTCTGC AACAAGCCCA TTTCTTACTT CCCTTCGTAG CCGATACTTC TTGCGTGCTA CGTACGAAGA CTCTTCTCAA GTGCAGGCCA TAAAATCTAT CATCAAATTG TTCGGGTGGA GAGAAGTTGT GCCAGTTTAC ATCGACAATA CCTTCGGAGA AGGTATAATG CCTCGTCTCA CCGATGCATT ACAAGATATT AATGTTCGGA TACCTCATAG ATCCGTTATC GCTCCCAATG CCACGGATCA AGAAATCTCC GTAGAACTTC TTAAGATGAT GAACATGCCC ACAAGAGTGT TCATTATCCA CATGTCCTCT TCTCTAGCCT CAAGATTCTT CATTAAAGCA AAGGAGATTG GTTTGATGAA ACCAGGATAT GTCTGGATCC TTACCAATGG AGTTATCGAT GGCTTAAGGT CGATAAATGA GACGGGTATT GAGGCTATGG AGGGGGTATT GGGTATTAAA ACTTATATTC AAAAATCCAA AGATCTAGAC ATGTTTAGAT CACGGTGGAA GAGGAGATTC CCACAGATGG AGCTGAATGT CTATGGATTG TGGGCTTATG ATGCTACCAC TGCATTGGCC ATGGCCATTG AAGAAGCTGG AATAAATAAC ATGACTTTCA GTAATGTGGA TACAGGGAGA AACGTTTCCG AACTTGATGC TCTTGGTTTA TCTCAATTCG GTCCAAAGCT TCTCGAGACG CTCTCAAAAG TTCAATTCAG AGGACTTGCA GGAGACTTCC GTTTTGTCAG CGGGCAACTG CAACCATCGG TGTTTGAAAT TGTCAATATG GTCGGGGCCG GAGAAAGATC AATAGGATTC TGGACAGAGG GAAATGGTCT TGTGAAGAAA CTTGACCAAG AACCACGAAG CATAGGTACT TTATCCACTT GGCAAGATCA TCTTAAGCTT ATAATATGGC CTGGAGAGGC TAATTCTGTT CCCAAAGGAT GGGAGATCCC GACTAATGGG AAGAAGTTGC GCATTGGAGT TCCCAAGAGA CTTGGTTTCA CTGATCTCGT GAAGGTCACA AGGGATCCTA TCACCAATTC AACTGTAGTC ACAGGTTTCT GCATAGATTT TTTTGAGGCT GTGATTCAAG CAATGCCTTA TGACGTCTCT TATGAGTTCA TTCCTTTTGA AACACCTGAC GGTAAACCAG CCGGTAATCA CAATGACTTG GTCCAGCAAG TGTACCTCGG GAGGTATGAT GGGGTCGTGG GAGATACAAC AATATTGGCG AACAGGTCCT CTTACGTTGA CTTCACTCTC CCATTCATTA AATCAGGTGT TGGAATGATC GTCCCAATGA GAGACGAAGT GAAAAGAGAC GAATTCAGCT TCTTGAAACC TTTGTCGATC GAACTATGGT TGACATCCTT AGTCTTTTTC TTCCTTGTTT CAATCTCTGT TTGGACTCTT GAACATAGGG TTAATCCGGA CTTCCGTGGA CCGGCTAATT ACCAAGCTAG TACCATCTTC TGGTTTGCCT TCTCTACCAT GGTTTTTGCT CCAAGAGAGA GAGTGTTTAG CTTCTGGGCG AGGGCCCTGG TTGTCACATG GTACTTCCTC GTTCTTGTGT TAACTCAGAG TTACACAGCC AGTTTGGCGT CGCTTTTGAC ATCACAGCAA CTACATCCAA CCATAACCAG CATGAGTAGC TTGCTTCATA AAGGAGAAAC AATCGGTTAT CAGAGAACAT CCTTCATCCT TGGAAAGCTT AATGAAACAG GTTTCCCACA ATCTAGCCTT GTGCCCTTTG ATACCGCAGA AGAATGCGCC GAGCTTCTGA AAAAAGGATC AAAAAAGGGT GGTATCTCTG CAGCTTTCTT GGGACCTTAC TTGAGACTCT TTCTTGGACA ATATTGCAAC ACTTATAAAA TGGTTGAAGA ACCCTTCAAT GTTGATGGAT TCGGCTTTGT TTTTCCAATC GGATCACCTC TGGTGGCCGA TGTTTCAAGG GCCATCTTAA AAGTAGCAGA GTCTCCAAAG GCAATGGAGC TCGAGAACGC ATGGTTCAAG AAGAAAGAAC AAAGTTGTCC TGATCCAGTT ACCAATCCAG ATTCAAATCC ATCTGTTACC TCTATACAGC TCGGCGTACG CAGTTTCTGG TTTCTGTTTC TTGTTGTGTT TGTTGTGTGC GTTCTAGCAC TCGGAAAATT CACATTCTGT TTCCTATGGA AGACAAAAGG GAAAGATTTG TGGAAAGAGT TTCTAAAACG AGACCCCGAC TCGTACATCA ACGACATAGA TAAATGTTTG TGTTCTCGAG AGATGCCTGA GAACAGCAAT AGAGCAACAA ACGGTGTTGA GTTAAGAGTT AGGAATATCT CATAG 
Length2715
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2976674.. 2979686
Download Sequence
A.thaliana
AGI-codeAT2G24720.1
Descriptionglutamate receptor 2.2
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.2][GLR2.2][glutamate receptor 2.2]
Gene coexpression
MR
MR Locus Description
8.94427 Ahg475192 Transmembrane amino acid transporter family protein
9.59166 Ahg340623
14.6629 Ahg934797
16.2481 Ahg322709
19.8746 Ahg914595 Dormancy/auxin associated family protein
20.7846 Ahg482014 Protein kinase superfamily protein
21.166 Ahg948369 GDSL-like Lipase/Acylhydrolase superfamily protein
26.3439 Ahg352566 indeterminate(ID)-domain 12
28.9828 Ahg907481 response regulator 3
29.2916 Ahg908168
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression