Detail



ID : Ahg325518

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325518|fgenesh1_pm.C_scaffold_6000738
Sequence
ATGGCTTCTA CTTCGTTAAC GGAACGAAAC AGAGCACTCT TCTCTGTTTC TACTCTTCTC CTCTGTTTCC TCCTCTGCAT CTCCGAGCAA TCGAACGCTC AGTCTTCTCC AGTCTTCGCC TGTGACGTCA CCGGAAACCC TTCTCTTGCC GGGCTTAGAT TCTGCAATAC GGGGTTGAAT ATCAAATCCC GAGTCACCGA TCTTGTTGGA AGATTGACGT TGGAGGAGAA AATCGGGTTT TTGGGAAGCA ACGCTATCGG CGTTAGCCGC CTTGGGATTC CGGCTTACAA ATGGTGGTCG GAGGCACTTC ATGGCGTCTC TAACGTCGGA GGTGGTAGTA GTTTCTCCGG GCAAGTCCCT GGCGCCACTA GCTTCCCACA AGTTATACTC ACGGCAGCTT CTTTCAATGT GTCTTTGTTC CAAGCCATTG GCAAGGTTGT ATCGACGGAG GCGAGGGCAA TGTACAATGT GGGATCAGCC GGTTTAACGT TTTGGTCACC GAATGTGAAC ATATTCCGGG ACCCGAGATG GGGAAGAGGA CAAGAGACCC CCGGCGAGGA CCCAGAACTC TCAAGCAAAT ACGCGGTGGC TTATGTTAGA GGTCTTCAGG AGACTGACGG TGGCGATTCT AACCGCCTAA AAGTCGCCGC TTGCTGCAAA CACTACACCG CATATGATGT TGACAATTGG AAAGACGTCC ATCGTTTCAC TTTCAACGCC GTGGTAAACC AACAAGATAT GGATGATACG TATCAACCAC CGTTCAAGAG CTGTGTGGTT GATGGGAATG TAGCGAGTGT TATGTGTTCT TACAACCAAG TTAACGGAAA ACCGACATGT GCTGATCCTG ATCTGCTTTC CGGCGTGATC CGCGGACAAT GGAAGTTAAA CGGATACATT GTTTCGGATT GTGATTCGGT AGATGTGTTG TACACAAAAC AACACTATAC CAAGACTCCA GAGGAAGCTG TGGCCAAATC TATATTAGCA GGTTTGGATT TGAATTGTGA TCATTTCACG GGTCAATACG CAATGAAAGC GGTCAAGGTG GGTTTGGTAA ATGAAACAGC TATTGACAAA GCGATTTCAA ACAATTTCGC GACTCTGATG CGTTTAGGGT TCTTCGATGG AGACCCTAAG AAGCAGCAGC TCTACGGTGG TCTTGGTCCT AATGACGTTT GCACCGCTAA TAACCAAGAA CTCGCTAGAG ATGCCGCAAG ACAAGGCGTT GTCTTGCTTA AGAACTCTGA TGGCTCGCTT CCGCTCTCAC CTTCCGCCAT CAAAACATTA GCCGTGATCG GACCAAACGC CAACGCCACA GAAACAATGA TCGGGAACTA CAACGGTATA CCATGCAAGT ACACAACGCC GCTTCAGGGA CTGGCAGAAA CGGTGTCGTC TACCTATCAG CTGGGCTGCA ACGTCGCATG CGCAGAACCT GATTTAGGCT CAGCCGCTGC TCTGGCTGCT TCTGCGGATG CTGTTGTGCT CGTGATGGGC GCAGACCAAT CAATTGAGCA GGAGAACCTT GACCGACTCG ACCTGTATCT GCCCGGAAAA CAACAAGAGC TTGTGACTCA GGTGGCTAAG GTGGCGAAAG GACCGGTGGT GCTAGTTATA ATGTCCGGTG GAGCGTTTGA CATTACATTC GCCAAGAACG AAGAAAAGAT CACAGGCATT ATGTGGGTCG GATATCCTGG TGAAGCCGGC GGTCTCGCCA TTGCTGACGT CATCTTCGGT CGTCATAATC CAAGCGGGAA TTTGCCGATG ACTTGGTATC CTCAATCATA TGTGGAGAAA GTTCCGATGA CGAATATGAA CATGAGACCC AATAAATCAA ACGGGTATCC GGGTCGGACT TACAGATTCT ACACCGGAGA AACCGTATAC GCCTTCGGAG ATGGGCTCAG TTACACTAAT TTCAGTCACC AGATTCTTAA AGCTCCGAAG CTAGTCTCTC TCGATCTTGA CGAAAACCAC GCTTGCCGAT CGTCGGAATG CCAATCGGTG GACGCGATCG GACCGCACTG CGATAACGCC GTCGGAGGAG GATTAAATTT CGAGGTTCAA TTGAAGGTAA GGAACGTCGG AGACAGAGAA GGGAGCCACA CGGTGTTTCT GTTCACGACG CCGCCGGAAG TACACGGATC GCCGAGGAAG CATCTTCTAG GGTTCGAGAA GATTCGTTTA GGAGAAAAGG AAGAGACGGT GATTAGGTTT AACGTCGATG TGTGTAAGGA TCTGAGTGTG GTTGACGAGA TCGGAAAAAG GAAAATCGCG TTGGGTCATT ATCTGCTCCA CGTGGGTAGT TTTAAACATT CATTGACCAT TAGCGTGTCA TAG 
Length2343
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3679732.. 3682610
Download Sequence
A.thaliana
AGI-codeAT5G09730.1
Descriptionbeta-xylosidase 3
TAIR curator summaryencodes a protein similar to a beta-xylosidase located in the extracellular matrix. This is a member of glycosyl hydrolase family 3 and has six other closely related members.
Alias[ATBX3][ATBXL3][BX3][BXL3][XYL3][BETA-XYLOSIDASE 3][beta-xylosidase 3]
Gene coexpression
MR
MR Locus Description
43.1509 Ahg487573 Pectin lyase-like superfamily protein
71.4983 Ahg940858 Integrase-type DNA-binding superfamily protein
97.6576 Ahg949205 transposable element gene
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression