| Annotation |
|---|
| Description | jgi|Araly1|331043|fgenesh1_pm.C_scaffold_8000386 |
| Sequence |
ATGGGAGATG GAGATGAGCA AAGTAAAGAG TTAGAAGGAC TCTCGTCTTC GAGTCGTCGT TCTTCGGGTC CTAGTTCTGC AAATGCAGAG GCAAGAATGA AGTTTGCTTC TGTTGATGCT ATAACAGAAT TAGTGTGGTC TCCTGGAAAC GGTCTAAGCT TAAGATGTGC AGATATCAGT TTCACGGGAA AAGCAAAATT AGTCTCTCCT AACTTCTTTG ATATAGGACT AACCAATATG GCGATTCATT CGAATAGTAC AAGTATCGAA CACCAAGAAG ATGTCGAATT GAGAAGCCGA GATCAAGTGA ACCAAGAAAG GATTGGTGGT TCTGTTGAGG ATATGAAACC TGAAATGGTT GAGGATAAGG TTGAAACCAA TGATGATATA AAGAATGAAG TAGCAGGAAG TTCCAAAAGA TCGTCAGATA GTCCGAAAGC TATGGAAGGA GAAACCAGAG ACTTGTTGGT GAATGAACAG TTGAGGATGG AAAGTGCTGG ATCTCAAGAA GGACCGACTA ACCGTGGAGA TAAAGATGAA GGGGATAAGG CGAATAATAG AATTGATCGT TTAGAATCAA TGGATGAGAA TAACCTTGCA ACTCTTGCTG TTGTAGCATG TGAAGGCAAA GGGGAATATT CACCGGAGAA TGAGGCTGGA CCTAGTGGTT CCTACAGGCG GCTGAAGCAA GATAGTTCCT TCATGAATTG GATATCAAAC ATGACAAAAG GGATCTGGAA AGGTAATGAA GAAGACGATT CTCCTTTTGC AGCTCTTACC ACCACCTCAG ATGCTAATGG TCATGGCCAA GTCAATGCAA TCGTTGACCA ACAACAATTG AGTCCATGCT GTGTGAAGGA AAATAGTGGA TGCAGAAACA CTGGTTTCCA GTCTTTTTTC CAGTCTATAT ATTGTCCGAA GAAACGAAGT CAAGATGCCG TCGAGATGGA TTTCCCGAAT GATGCTAATG CTACTTCTTT GCAGGAACTT CCCTGGATTC CTGAACAATG TGACATTGCC AAAGGGGATG ACTTGTCTTC ATCTGGTAAT GATATTGGTC CAGTGGCTGA ACCCAACATT TCATCAGGAA AAGTTGGATT TAATCAGAGA AGCGAAACAC TCTCGTCAGA GAACAAACGT GAGGACAAAG AACCAAACAT CTCTTTGATG TCTCTTAGTA AGTCTAAGCC AAATGAAGAG CCAAAAATCT GCGGTGAAGC TGGTGGAAAG GTTAGTCCAT GTTTAAACAA CAGAAACTCT GGTCTTCAAA GTTTGTGGAT AAGCCGGTTT TCTTCTAAAA GTCCGTTCCC TCAGAAAAAG ACCAGTGAAA CGGCTAAAGA GGTCAATGCT TCAGCCTCAG ACACAGCTAA AACCCATGAT TCGCAGAAAA TGCTGGTAAA TAATAATGTT GTAATACCCA GTATCAGCTC GGTAGATGGG CTCGATAAAC CGAACACTGT CCTTCCCATA GTTTCGTCAA TGAGAATAGA GTCTTCAGAA GCAATGGCTT CTTTGTTTGC TAGAAGGATA GAAGCAATGA AACACATCAT ACCCGCAGGT TCTTTAGCTG AGAATGCAGA GGAGGAACAG CCAAATCTAA TCTGTTTCTA CTGCGGTAAA AAGGGTCATT GTTTACAGGA TTGTTTGGAA GTAACTGATA CTGAGCTCAG AGATCTAGTA CAGAACATAA GTTCTCGGAA TGGAAGAGAA GAAGCGTCAA GTCTATGCAT TAGATGTTTT CAGCTAAGTC ACTGGGCTGC AACATGCCCG AATGGTCCAC TGTATAGTTC AGGAGCTGAA GATAGAGCTA TGAAGCACAC TTTAGCTTCT ACCTCTGGCA TGAAGCTGCC CGTAAGTGGT TTCACAGATG TACCAAAGGC GGTCTTTGAG GCTGTTCAAG TGCTTCGCCT CAGCCGCACA GACGTTCTCA AATGGATAAA CACCAAGAAG TCTTTATCGG GTCTCGAAGG GTTTTTCTTG CGGTTAAGGC TCGGGAAATG GGAAGAAGGT CTTGGAGGAA CAGGGTACTA CGTAGCCCGC ATAGATGAGG GACAAAGCTC AAGGAGACAT TCAGAGAAAA GCTCAATCTC AGTTAAGGTT AAAGGGGTGA CTTGCCTTGT TGAGTCTCAG TTTATCTCAA ACCACGACTT TCTTGAGGAG GAGTTGAAGG CGTGGTGGCG GAGCGCGGGG AAAAGTGCCG AAAGAAGCGG CTGCGAGGGC ATCCCATCGG CAGAGGAACT TAGTCGGAAA ATTCAGCAGA GAAAGATGTT AAATAGATAA |
| Length | 2280 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 3835012.. 3837952 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G43630.1 |
| Description | zinc knuckle (CCHC-type) family protein |
| TAIR curator summary | Encodes a zinc knuckle protein that negatively regulates morning specific growth. The role of TZP in hypocotyl elongation was established through a QTL analysis of BayXSha RIL populations. The Bay-0 allele contains a deletion causing a frameshift mutation. TZP is under circadian control and acts to regulate morning-specific hypocotyl growth. |
| Alias | [TZP] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.74456 |
Ahg474897 | Glutaredoxin family protein |
| 8 |
Ahg350602 | high affinity nitrate transporter 2.7 |
| 9.32738 |
Ahg902003 | Major facilitator superfamily protein |
| 10.9545 |
Ahg477094 | evolutionarily conserved C-terminal region 8 |
| 12.1244 |
Ahg488595 | Homeodomain-like superfamily protein |
| 12.9615 |
Ahg931833 | arginine decarboxylase 1 |
| 16.9411 |
Ahg920834 | Pentatricopeptide repeat (PPR) superfamily protein |
| 17.5499 |
Ahg930138 | UDP-glucosyl transferase 71B1 |
| 18.735 |
Ahg470177 | Homeodomain-like superfamily protein |
| 18.9737 |
Ahg934499 | SOUL heme-binding family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|