Detail



ID : Ahg331457

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331457|fgenesh1_pm.C_scaffold_8000800
Sequence
ATGACTAATC AAGGTGGTCC GTCGAGAAAA AGTCTCTCGT TCTCCGGTCA TTCATTTCAA GGAAGGAAAA AAGCTTCAGA AAACGAAGGT GGTGGTGGTG GTGGCTCTGA CCTCCTCCCA CGGCGATCTC TCACATCTTC TCGTTCTTCC ATAAGTTTGA GTGGGGAAAG GAGCGGAGAG AGAACGGTAA AGAGACTAAG GTTGTGTAAG GCACTTACTG TACCCGATAG CACAACTTTA TTTGAAGCTT GTCGAAGAAT GGCTGCACGT CGCGTTGATG CGCTATTGCT GACTGATTCC AATGCATTAC TCTGTGGGAT CCTTACAGAC AGGGATATAG CAACGAAAGT GATTGCTAAA CAACTTAACC TTGAAGAAAC ACCTGTATCT AAAGTTATGA CCAAGAACCC TGTTTTTGTT TTGTCTGATA CTATTGCTGT GGAAGCTCTT CAAAAGATGG TGCAAGGCAA ATTTAGACAT TTGCCGGTGG TGGAGAATGG AGAAGTTATT GCGCTTCTCG ATATTGCAAA GTGTTTGTAT GATGCAATTG CTCGCATGGA AAGATCAGTT GAGAAGGGTA AGGCTATTGC TGCAGCTGTT GAAGGCGTTG AAAAGAACTG GGGAACATCT ATTGCAGGAC CAAACACTTT TATGGAGACA CTTAGAGAAC GAGTATTCAA GCCTTCACTT TCAACTATAA TTCCAGAGAA TACAAAGGTT TTAAAGGTTG GATTGGATGA TACTGTGTTA GGAGTAACCA TGAAGATGGT CGAATATCAG TCTAGCGCAG CCATGGTGAT GGTTGAGAAC AAATTAGTAG GGATTTTGAC ATCAAAGGAC ATCTTGATGC GGGTGATATC CCAAAACCTT CCTCAAGAGA CAACTACTGT GGAGAAGGTT ATGACACAGA ATCCAGAATC TGCAACAGTT GATATGGCAA TTGTTGATGC CTTGCATATC ATGCATAATG GAAAATTTCT GCATCTTCCT GTATTAGATA AAGATGGAGA TGTTGTCGCT GTGATTGATG TGATCCACAT AACTCATGCT GCTGTTACTA CGGCGGGAAG TACCGCTGGA ATAAATAATG AGACAGCAAA CTCAATGATG CAAAAGTTTT GGGATTCTGC GATGGCGCTA TCGCCTACTG AAGATATAGA TGAAACGAGG AGTGAAGAAG AATCGATGAA ATTATCTTCG GAGATAGAAG GGACAAAATC ATTCTCATAT CCCAACACAT TTGCTTTCAA ACTCCAAGAT AAAAAGGGAC GAATGCATAG ATTTATGTGT GAAACACAGA GTTTGACAAC TCTGATAACA GCAATTCTAC AAAGAATGGG GGATGATATT GAGCCTGATA ACTTGCCTCA AATAATGTAC GAAGATGAAG ACAATGACAA AGTCGTTTTA GCATCAGATA ATGATCTTGG AGCTGCCGTA GAACACGCAA AATCAATAGG CTGGAAGGGT TTAAAATTGC ATTTGGACTA CACAGAAGAA AGAGGACACA GGAGAGGTCT AAGCTCAGAG GATATGGACT ACGACCAGTC AAACTCATGG GCAGCCGCTT ACAAAACGGT TGCAGCCGGG GCTGCTCTTG CTGCTGGACT TGGAGTTTTG GTGTACCTTA AGCGCCACTC AAACTAA 
Length1647
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13243973.. 13247120
Download Sequence
A.thaliana
AGI-codeAT5G50530.1
DescriptionCBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.6643 Ahg473644 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
27.3861 Ahg494661 type one serine/threonine protein phosphatase 6
30.1164 Ahg474732
33.2265 Ahg481887 UDP-Glycosyltransferase superfamily protein
48.6313 Ahg480557 ubiquitin-conjugating enzyme 29
54.9909 Ahg492573 non-yellowing 1
55.3895 Ahg934176
56.5685 Ahg905161 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
58.3781 Ahg903224 Homeodomain-like superfamily protein
61.0574 Ahg482873 Protein of unknown function (DUF567)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression