Detail



ID : Ahg333306

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333306|fgenesh1_pm.C_scaffold_378000001
Sequence
ATGTCATCTT CCAACGTCGG AACAGAAGTG TTCATCAATT TCCGAGGCGA AGAGCTGCGT AACAACTTTA TCTCCCATCT ACATGACGCT TTGCACCGCA TGGGGATCAA GGCTTTTATA GACAGTGATG AGCCACCGGG TGAGGATCTT GATATATTTT TTAAAAGGAT TGAGCAGTCC AAGGTCGCAC TGGCAGTCTT ATCGAGTAGG TATACAGAGT CACATTGGTG TTTGGAAGAG CTGGCGAAGA TAAAGGAGTG TGTGGATCGA AGCTCTCTAC GGGTTATTCC AATCTTCTAT AACGTGGACC CAACCACGGT GAAAGAGCTC GATGGAGATT TTGGTCTTAA GCTATGGGAT TTATGGAGGA AGGACGGTCG AGACAACCGG ATCCTGAAGT GGGACGCCGC TTTGCAGGAC GTTGTGGACA AGATTGGCAT GGTGTTGGGA ATCCGGAACG AATCCGAGTT CCCGAAGGCA GCTCTAACCG AGCACCAAAC AGTATCAAAC CCTAAACCTA AAGAAGCCTC TAACGGTAAC GGAGCACCAA GAAGTATCAA ATCAGGCGGA CAACGCTTGA CACAATTAGA AGAAAAGTTG GATTTGGATT GCAATGAAAA CAAAACCCGC TATGTAGGAA TTGTCGGGAT GGCTGGTATC GGCAAAACCT ATCTCGCCGA TAAACTGTTC CAAAAGTTGA AGACGAAGAT CGGCTGTAAC GTGTTCCTGA AGCTTGTCCG TGAGAAGACA ACCGATGAGG ACCTGTATTT GGAGAAGAGG CTTGTGGAAG GGTTACTGAA TAAAACTATA AATTTCAGTA GTAAAAATCC ACTTGAGGAA CGGAAGAATG ACCTAATCCA GAAGAAAGTT GTGGTTGTTT TGGATAATGT GAGTGACCAG AAAGAGATCG AGCCGTTTCT AGGGATTTGC AACTGGATTA AGGAGGGGAG CATAATCGTC ATCACTACAC GGGACAAGTC ACTGCTCAAA GGAATGAACT GCGATATCTA TGAGGTCCCC AAAATGAACG ACAGAGAGAG CTTAGAGCTC TTTAAAGATC GAGCTCAAGT CTGTAGCAGT ACTAATTTTG AAGAAAATTT CATGGAGCTG TCTAAGAAGT TCGTGGATTA TGCGGGAGGG AACCCATTAG CACTCAAGAA TATTGGTAAG GAGCTCTACG CGAAAGAAAA GGATCACTGG GAAGAAAGAC TTAGAACACT GACACAGTGT TCCAACCCTA AGGTCAGAGA GAAGTTAAGA AGCTCTTATG ATGAACTAAA CGAGCAGCAG AAGGATGCGT TTCTTGATAT AGCCCATTTC TTCAGATCAG AAGATGTGAA GTATGTTACA AGTTTACTTG ATTCTTTTGA CCCTGGATCT GCCGAAGCTG GGAAGGAACT AATTAAAGGT CTCGTAGACA AGTTCTTGAT TAGCGTATGT GATGGTCGGG TTGAGATGCA TAATCTACTC TTAACAATGG CTAAGGAACA TGTTGGAGAT ACCGCAGGGA AATACTGGCT GTGGTCGTCG AATTGTGAAG AGTTTACTAG TGCGTTGAGT AACATAGAGG GAAAAGACAA GGTTAGAGGA ATTATCATAG ACATGTCTAA TGTGGAGGAA ATGCCCTTAG ACAACCAAGC CTTTGTTGGT ATGAGCAGTC TACGGTACCT GAAAGTGTGT GATACTGGCC ATAGTGAAGC TCAGTGCAAG TTGAACTTAC CCGATGTACT TGAATTCCCA AAAGATAATA TTGTCCGCTA TCTTAACTGG GTGAAATTCC CAGGAAAGGA ACTTCCATCA GACTTCGAAC CCACAAATCT TATCGATCTT AGGTTGCCTT ACAGTAAGAT TACCAGTGTA TGGAAAGATG CTAAGGTTGC ACCAGAACTG AGATGGGTTG ATCTCAGTCA CTCGAGTAAC TTGAGTTCCT TGTTAGGATT ATCAGAAGCA CCAAAACTTT TGAGATTAAA CCTCGAAGGC TGCACGAGTT TGAAAGAGTT ACCAGAGGAG ATGCAAAAGA TGAAGAAACT CGTTTCCCTA AACCTAAGAG GATGCACAAG TCTCTTGTCT CTGCCAAAGA TCACTATGGA TTCCCTGAAG ACTCTCATTC TCAGCTGCTG CTCAAAATTT CAGACATTTG AGGTGATTTC AAAGCATCTA GAAACTTTGT ACTTAAACAA CACTGCAATA GATGAACTTC CTCCGACCAT TGGTAATCTC CATGGACTTA TCTTCTTGGA TTTGAAAGAC TGCAAAAATC TGGCGACTCT TCCTGATTGT CTTTGGAAGA TGAAATCTCT TCAAGAACTC AAACTCTCTG GTTGCTCAAA GCTCAAGAGT TTCCCTAATG TTAAGGAGAC CATGGTAAAT TTGCGGATTT TGCTGCTTGA TGGAACATCA ATTCCACTGA TGCCAAGCAA AATTTTTGAC TCATCCTTTC TGAGGCGTCT ATGCTTAAGC AGGAATGAAG AAATCTGCAG CCTACTATTT GACATGAGTC AACTGTTCCA TCTGAAATGG CTCGAGTTGA AGTATTGTAA GAACCTTACA TCTCTTCCGA AGCTTCCACC GAATCTTCTG TGCTTAAATG CACATGGTTG TAGTTCACTA AGAACAGTTG CGAGTCCACT AGCCAGTCTT ATGCCAACAG AGCAGATTCA TTCCACCTTT ATTCTTACTG ACTGTCACAA ACTGGAACAA GTCTCAAAAA GTGCTATCAT ATCTTACATT CAGAAGAAAA GCCAGTTGAT GTCAAATGAT CGACATAGTC AGGATTTCGT TTTCAAGTCC TTAATTGGTA CTTGCTTTCC TGGATGTGAT GTACCAGCAT GGTTCAACCA CCAAGCACTT GGGTCAGTCT TAAAACTGGA GCTGCCTCGA GATGGGAATG AAGGAAGATT AAGTGGTATA TTTCTATGTG TTGTAGTCTC ATTTAAGGAG TATAAAGCCC AAAATAACAG TCTCCAAGAG TTGCATACGG TTGTGTCGGA CCATGTCTTC ATTGGCTACT CCACTCTGTT TAATAGCAAG CAACGTAAAC AGTTTTCATC AGCTACTGAA GTATCCCTTA GATTTGAAGT GACAAATGGT ACAAGAGAGG TTGCAGAATG TAAGGTGATG AATTGTGGCT TCTCTTTGGT TTATGAGTCT GATGAAGCTG AGAGCGCAAC TTGGGAGGCA AATCTTATGG AGAACAGTAC AAAAGGCAAT AAAAGTGGAT GCATTCAAAT AAAGTATCAG AAAAACAATC TCGGAGGAGA GGCAATAAAG CAATAA 
Length3276
Protein Sequence
Protein Residue
Map Locationscaffold_378: 126.. 5039
Download Sequence
A.thaliana
AGI-codeAT5G45230.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.74166 Ahg942872 Subtilase family protein
15.8745 Ahg484953 Major facilitator superfamily protein
19.7737 Ahg921385
22.383 Ahg930322
23.4307 Ahg948468
23.6643 Ahg495450 Protein of unknown function (DUF1278)
26.9258 Ahg909736 early nodulin-like protein 7
32.1714 Ahg942539
32.5576 Ahg343060 F-box family protein
36.0832 Ahg932285 Acyl-CoA N-acyltransferases (NAT) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression