| Annotation |
|---|
| Description | jgi|Araly1|337864|fgenesh1_pg.C_scaffold_1004429 |
| Sequence |
ATGAAGAGTT TAAAGTTAAT CTTACACAGA GCGTACTCCA CAAGCACTGG AGTCAATAAT AGTTTTGAGA TCTCTCGTCT CTCACGAATC GGTCAAATCA ATGAAGCTCG AAAGTTTTTC GATTCGTTAC GCTATAAAGC AATCGGTTCC TGGAACTCAA TTGTCTCTGG GTACTTCGCA AACGGTTTAC CGAGAGAAGC ACGCCAAATG TTCGATGAAA TGCCTGAGAG AAATATAGTT TCTTGGAACG GGTTGGTTTC AGGGTATATT AAGAATAGGA TGATTGAAGA AGCTAGGAAT GTGTTTGAGA TAATGCCTGA GAGGAACGTT GTGTCGTGGA CCGCGATGGT TAAAGGTTAT GTGCAAGAAG GTATGGTTGT TGAAGCGGAG TTGTTGTTTT GGAGAATGCC TGAGAGGAAT GAGGTTTCTT GGACTGTGAT GTTTGGTGGT TTGATTGATG GTGGACGTAT CGATGATGCG AGGAAGTTGT ATGATATGAT GCCGGGGAAA GATGTTGTAG CGAGTACTAA TATGATTGGT GGGTTGTGTA GAGAAGGAAG AGTGGATGAG GCAAGAGAGA TTTTTGATGA GATGAGGGAG AGGAATGTGA TTACTTGGAC TACGATGATT ACTGGGTACG GGCAGAATAA GCGAGTGGAT GTTGCTAGGA AGTTGTTTGA AGTGATGCCG GAGAAAACTG AAGTTTCGTG GACTTCTATG CTTTTGGGGT ATACTTTGAG TGGGAGAATT GAGGATGCTG AGGAGTTCTT TGAGGTGATG CCGATGAAGC CGGTTATTGC GTGTAATGCT ATGATTGTTG GGTTGGGTGA GGTAGGAGAG ATAGTGAAAG CGAGGAGGGT TTTTGATCAA ATGGAGGATA GAGATAATGC GACTTGGCGA GGAATGATTA AAGCTTATGA AAGAAAAGGT TTTGAATTGG AGGCTCTTGA TTTGTTTGCT CAAATGCAGA GACAAGGAGT TAGACCGAGT TTTCCGTCTT TGATCAGCAT TCTTTCGGTT TGTGCCACTT TAGCAAGTCT ACAATATGGT AGGCAGGTCC ATGCTCACTT GGTTAGATGT CAGTTTGATG GTGATGTGTA TGTTGCCTCT GTTTTGATGA CCATGTATGT CAAATGCGGT GAGCTTGTAA AAGCAAAGCT AGTATTTGAC AGGTTTCCCT CAAAGGACAT TATCATGTGG AATTCAATCA TCTCTGGTTA TGCGTCGCAC GGTTTAGGAG AGGAAGCTCT TAAGGTTTTC CATGAGATGC CATTGTCTGG TACCATGCCA AACAAAGTGA CCTTAATTGC AATTCTGACA GCATGTAGCT ATGGTGGAAA ACTCGAAGAA GGGCTTGAGA TATTTGAATC AATGGAATCC AAGTATTGCG TGACACCAAC GGTTGAGCAT TATTCTTGCA CGGTGGATAT GCTTGGACGT GCAGGAAAAG TAGATAAGGC AATGGAATTG ATCAATAGTA TGACTATAAA GCCAGATGCT ACAGTTTGGG GTGCTCTGTT GGGAGCGTGT AAAACTCACT CAAGACTAGA TTTAGCCGAA GTTGCTGCAA AGAAACTCTT CGAGATAGAA CCAGAAAACG CTGGTCCATA CATTTTGCTA TCAAGCATAA ATGCATCTCG ATCCAAATGG GGAGATGTTG CAGAAGTGAG GAAAAACATG AGGACAAAGA ACGTAAGTAA ATTCCCTGGA TGTAGCTGGA TTGAGGTAGG GAAAAAAGTG CACATGTTCA CTCGCGGAGG TATCAGAAAC CATCCCGAGC AAGCGATGAT ATTAATGATG TTGGAGAAAA CAGATGGATT ATTAAGAGAA GCTGGTTATA GTCCTGATTG CAGTCATGTC TTACACGATG TAGACGAGGA AGAGAAAGTT GATAGCTTAA GTCGTCACAG CGAGAGACTC GCGGTAGCTT ATGGACTCTT AAAGCTACCC GAAGGAGTAC CTATTCGAGT CATGAAGAAC CTTAGAGTCT GTGGAGATTG CCATGCCGCC ATTAAACTCA TTTCTAAAGT TACAGAAAGA GAGATCATTC TAAGAGATGC AAACAGATTC CATCATTTCA ACAATGGAGA GTGTTCTTGT AGAGACTATT GTTGGGTTCG TACGGAAATA GAAAAATCTG CAAACTTTAT TCTTTATGTT GATAAAAAAC AGGTTTATGT TTCAGTTGTA TTGATGGGTT CTGAAGGACC AACAGGTGTG ACGATTCATA TCACAGGGTT CAAGAAGTTC CATGGAGTAG CTGAGAACCC TACAGAGAAA ATGGCTAACA ATTTGAAAGA GTATTTAACG AAGAATTGTG TGTCGAAAGA TCTGATTCTT GGTAGCTGTA CTGTGCTTGA GACTGCTGGT CAAGGAGCTC TTGCTTCTCT TTATCAGTTG TTACAATCCG CGGTTAACAC GAAAGAATCA GAGTCGTTGA CTGGAAAAAC CATTTGGGTT CACTTTGGAG TTAATAGCGG CGCTACGAAA TTTGCAATTG AGCAACAAGC TGTGAATGAA GCGACTTTTC GTTGTCCTGA TGAATTGGGT TGGAAACCTC AGAATTTGCC GATTGTTCCC TCGGATGGTC CAATCTCAAC TGTAAGAAAG ACGAATCTTC CTGTTGAAGA GATAACAAAG GCGTTGGAGA AGAAGGGCTT TGAGGTGATA ACATCAGATG ATGCAGGTCG ATTTGTGTGT AACTATGTCT ATTACCACTC TCTGAGATTT GCAGAGCAGA ATAAGACCAA ATCACTCTTT GTTCACGTTC CTCTTTTTGT TGCCGTGGAT GAAGAAACCC AAATGAGATT CACGGTTTCT CTGCTGGAGG TACTCGCTTC TATTTGCAAG TAA |
| Length | 2853 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 31103994.. 31107817 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G56690.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg478973 | ubiquitin-conjugating enzyme 25 |
| 12.5698 |
Ahg314419 | ATP binding;leucine-tRNA ligases;aminoacyl-tRNA ligases;nucleotide binding;ATP binding;aminoacyl-tRNA ligases |
| 45.2659 |
Ahg476282 | other RNA |
| 47.697 |
Ahg921700 | ENTH/VHS/GAT family protein |
| 48.0625 |
Ahg918289 | |
| 62.9285 |
Ahg925037 | splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein |
| 63.1189 |
Ahg892274 | SGNH hydrolase-type esterase superfamily protein |
| 67.6387 |
Ahg480938 | diacylglycerol kinase 5 |
| 82.7526 |
Ahg312135 | |
| 86.9483 |
Ahg890756 | Pre-mRNA-processing-splicing factor |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|