Detail



ID : Ahg346838

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|346838|fgenesh1_pg.C_scaffold_5000230
Sequence
ATGGATCCGA TGATCAATTC TGTGGAGTAC AATGGCGTCG ACGAGCATGG TTGGAAGAAA GTAGTGTCCC GGAAGCGCGT TCGGAAGCAA AAACCGGAGG ATCAGGCGGC CAATGGAAAC CTAGCTAATA ACGATAAATC GAACTGTGCG GCGGCGAATG AAAACCTAGA TTACAGCGAG GAGCAAGCTG GTGATGTGGT GGATGAATCG AATCTGAAGG CGGAGGAAGA AGAAAAACCG GATTGGAAAT TGTCTCTTGC CAAAGCTGCG GCAAAGATCG GTCCTTCAGA TCTTGCGGAT TTCCTCGACC GAGTACCGGA CACGTATCCG CTTGTGGCGA GTTTTCAGCT AGCGAGATTT CTCGATTACT ATGAGGTTGC ACTTGCCGGA GTACCTTGTC CATGGCGTCA GATGCTCCAG GAGTCTGATT TGCCCAACCT GTTCGATGTG CTCCATGTTC CGTTATCTTA TATTCCTGAA CCTGTCTACA AAACATCAAT CTATTGGCTC GACCAACTAG TTCCATCGAC GGAGTTACGC TGTGACTTTG TCTTGTTGTC GTTTAATTAT ATTCTCTGTG ATTTGTATAT ACAACGAGGA GGAGTTTTTC ATGATGAAGC TATGCATCTA GGATATGCTA AACCAGGTGA TCCTTGCGTA TCTGAGGTGT CAATATTTGT TACATTAGCA ATGCTTGTGC GTAGCGATCC TCTTGTCTTG ACTAGGGTTC TGCCCTCTCT GTGGGTCAAG CGATATTTTC ATGGACCTGG CCGGATTCCG CTTACAATTT GGTTGGTAGA TCAGGCCTCC CAAGATAATT TACCTGTAGG CTTGTATTCA TGGGTGCATA GCTTGTTACC ACTAGTCCCT AGAATTCCTG AGTCAACGGA TCCCATCCTA AAGTTGGTTG AGAAAATTCT GGCGAAACCA GACGCTCAAA CCATACTTGT AAATGCTCCT GTTTGGGATG GAAGGCGACT GATTCCACCT CATATATTTG AGGCCTTGCT GTGGCTTACA TTCCCTGTCA CATCCGAAAG AGAAGAGGCT ACAAGTAGGT TTGAGGCAAT TTATCCCTTG TTAAAGGAAG TGGCTCTTGC CAGTACATCA GGAAACGAGG CAATAAAACA GATATTCACT TTTTCTTTGA AATTATCTGG AGAAGAAGGG AATCCAGCTT TAGTAAAGGA AGCTACAGAA ATCGCTATCC GGTCTCTGAC CGAAAACGTT GTTTGGTGGA AGCTCTGGGA AAGTATCTAC AAGGAGAATC TGAAAGAGAG TCTCACTCTT CTTAAAAAGC TTCTAGGAAA ATGCAAGGAC AGTACACTAG GAAGCAAGGC AATGATTCAA CAGATATTCA CTTTGTCTTT AAAATTAGCT GGAGAAGGAA ATCCTGTTTT ACCCCAGCAA GCTACAGCAA TTGCTATCTG GTCTGTGACC AAAATCGTTG ATTGCTGCAA GCACTGGGAC AATCTCTATG AGGAGAATCT AAAAGCTTGT GTTGATCTTC TTAAAAAGCT TGTAGAGAAG TGTGAAGCTC ATTTCCTCAA ACTATCACCA TCACCGAGTA AATGTACTCT TACCGGTTCA CCAGGAAGCA AGGCAATGAA ACAAGTTACT CAAAAGATAT TCACTTTGTC TTTGAAATTA GCTAAAGAAG TTACAGGAAA TCCTGTTTTA GCCAAGGAAG CTACATCAAT CGCTATCTGG TCTCTGACCG AAAACGTTAA TTGGTGGAAG CTCTGGGAGA ATCTCTATAA GGAGAATCTA GAAGCTAGTG TTGCTCTTCT TAAAAAGCTT GTAGACGAAT GGAAGGGTCA TTCTCTCAAA TTATTATCAC CACCGAGTGA TACGCTCACT CTCAGTCAAA CTATAAAGAG CTTCATGCTA AAGAACAAAA AAGCCATCAC TGAGAGAGAA GCCAAAGCTT CTCTTTACAA AGAAGCTGAC GAGTCCTGCA AAGTGATATC TGGAAGACTC CCTCGTGGAA GTATCAGCCT CAAAGGTACA ACCATTACTG TTGTGGTTCT AGTTGCTACT GTGGTTCTAG CCGCTGGTGC ACATGGTTTA TCTTACAACC CGTAG 
Length2085
Protein Sequence
Protein Residue
Map Locationscaffold_5: 1737271.. 1740221
Download Sequence
A.thaliana
AGI-codeAT1G70770.1
DescriptionProtein of unknown function DUF2359, transmembrane
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
35.4119 Ahg495010 prefoldin 3
40.9268 Ahg324413
45.8912 Ahg913701 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein
62.57 Ahg496352 Exostosin family protein
65.2687 Ahg931419 ribosomal protein S15A B
66.0757 Ahg484579 NADPH:quinone oxidoreductase
73.7292 Ahg485647 Integral membrane Yip1 family protein
80.5543 Ahg493828 VIRB2-interacting protein 3
86.487 Ahg319882 RPM1 interacting protein 13
88.7243 Ahg888463 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression