Detail



ID : Ahg349841

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349841|fgenesh1_pg.C_scaffold_6000434
Sequence
ATGACAGAGG ATCGACTTCG AAATGTCTTT TCAAAAAAAG GAGAAATCAC AGACGTGAAA TTGAGGCGTA AGAGTGATGG CAGAAGTAGA CAATTTGCTT ATATTGGCTT TCGTACTGAA CAAGAAGCTC AAGATGCTAT CACATATTTT AACAAGTCTT TCATTGATAC TATTCAAATA TCTGTTGAGG TTGCGATCCC TCCTCCGAGG AAAGAAGGCA AGGTTATTGA AAATAGTGAA CATTTTTCTA ATGCTTATGC TAAAGGAGAC AAAAAGTTTA AGAAGAAAGC AGAGGCTGAT CATGATCCTC AGCTTCAAGA ATTTCTTGAT CAGCATACGA AGTTGAAATT CTGGTCCAAT GACATGTGTA TTCCTCGTTC CTCCGGCAAA GAGAAGGTCT CGCCTGTAAT TTTTTCCAAT GGTGCTGATG AGCCTAACAA AGCCAAAACA TCATTATTAG ATACTACAGA GAATAAAGTT GGTGATGATG TTTCTGATAT GGAATACTTC AAGAGTCGGA TATATGGAAT ACTTCAAGAT GATTATTATG AAACTGATAG TCGTGAAGAT GCAATTCATG CTTTTCCTAT TGATGGAGAT ATTGAAGCTG ACAGAGTTGA TGTTCTTGAC ACTGGTCGCC TTTTCGTCCG TAACCTGCCT TACACTGCAA CAGAAGAAGA GCTTACGGAA CATTTCAGCA AATTCGGTGA AATATCAGAG GTCCATCTTG TTCTTGACAA GGAGACAAAA AATTCCAGAG GAATGGCCTT CGTCCTTTAC CAGATACCGG AATATGCAAA AAGGGCAATG GAGGAATTAG ATAACAAAGA TTTCCAGGGG CGGCTGTTGC ATATTTTACC AGCTAAGAAG CCTGATAAAC AAGTGTCAGT GACCAGTTCT ATGTTTCGAA ATAACTCTTC TAATCTGCCA AAAGCATTCA AGCAAAAGAG GGAGGAACAA AGAAAGGCGT CTGAAGCCAG TGGAAATACA AAAGCTTGGA ATAGTTTTTT CATGCGACCC GATACTGTCG TGGAAAACAT AGTCAGGTGT TATGGTGTAA CAAAGAGTGA GTTTCTTGAC CGTGAATGCG ACGATCCTGC AGTACGACTT GCTTTGGGAG AAACAAAAGT GATTATGGAG ACCAAAGAAG CACTTGCTAA AGCTGGAGTA CGTGTCACCT CTTTGGAAGA ATTTTCTGCA CGGAAAGGTG ATGTGAAGAA CCGAAGCAAA CATATTCTCT TAGTAAAGAA TTTGCCATTT GCTTCCAGTG AAAAGGAACT GGCTCAAATG TTTGGAAGAT TTGGAAGTCT AGACAAAATT GTTCTCCCTC GGACGAAGAC GTTGGCTTTG TTTGTTTTCC TTAAACCGGC TGAGGCACGT GCAGCTATGA AGGGAATGAA ATACAAGCGT TACAAAGATG CTCCCCTGTA TCTGGAGTGG GCTCCTGAAG ATATTCTTGA GCCAAAAGCA CTTCCTGATA ACAATGAAAA GACGAGTGAT GTTGAAGAAA ATGATGTGAG AAGACTCAAC TTGGATCAGC AGGTTGGAAT CGATTTGGAT ATAACTGAGT CAAATGTCCT TTATGTTAAG AATCTGAACT TCAACACAAC TGATGAGAGT TTGAGGAAGC ATTTGACTGA ACTGGTGAAG CAGGGAAAGA TTCTGAGTGT TAAGATAAAA AAAAATGGGA AGAGTCGTCC TCGTTCAAGC GGTTATGGTT TTGTAGAATT TGACTCCGTA GAGACAGCGA CCAGTGTCTA CAGAGATCTA CAGGGAACAA CTTTTCTGGA TCGGCATAAA TTGATCTTGA GATTCTCTGA AAACAAGCGG ACTTTTGAAG CAACCAAGCA AGAACTAAGA CAGCTTTTCA GTCCATTTGG ACAGATCAAG AGAGTTGAGC TTCCAGAGAA GAATCCGGGA AGATATGCTG GTTATGGTTT TATTGTATTT GGGACAAAGC AAGAAGCTTT AAACGCTAAA AAGGCATTAT CCAACACCCA TTTCTATGGA CGCCCTTTGG TGCTCCAGTG GGCTAGGGAT GACAAGAGAA AATCTTCTGC TGCCAAGTAT GTGCAATAA 
Length2079
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4231131.. 4234472
Download Sequence
A.thaliana
AGI-codeAT5G08695.1
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.54983 Virus1442
14.0357 Ahg934439
17.0294 Ahg323422
19.5959 Ahg896096 Concanavalin A-like lectin protein kinase family protein
21.2132 Ahg496341 RmlC-like cupins superfamily protein
22.8035 Ahg942676 Heat shock protein 70 (Hsp 70) family protein
23.8747 Ahg895628 Ubiquitin-like superfamily protein
26.4008 Ahg936371 LOB domain-containing protein 24
27.3496 Ahg948572 alpha-1 tubulin
33.3167 Ahg895033 low-molecular-weight cysteine-rich 36
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression