Detail



ID : Ahg350386

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350386|fgenesh1_pg.C_scaffold_6000979
Sequence
ATGATGAGCT CTCAAGTCTC ATGGTGGGTT TTTTGGGTAA TCAGTGCTGT GTGTATTCTC AACGTGGAGT TTAACATTGT CGAAGGAGGA GCCTATGAAG AGACTAAGGT CCACATAGTA TACCTTGGTG AAAAGGAGCA TAATGATCCT GAGCTTGTAA CGGCCTCGCA TCTCAGAATG TTAGAATCCC TACTCGGAAG CAAAAAAGAC GCTAGTGAGT CCATAGTTCA TAGTTATCGC CATGGTTTCT CCGGCTTTGC TGCCCATCTT ACGGATTCCC AAGCAAAAAA AATCTCGGAG CATCCAGATG TAGTTCAAGT AACGCCCAAT AGTTTCTATG AGCTGCAAAC GACAAGGACA TTTGATTACT TGGGGCTTTC TCAAAGCACA CCAAAAGGAC TTCTTCATAA AGCCAAGATG GGCAAGGACA TCATCATCGG TGTCTTGGAC TCGGGTGTGT GGCCAGAGTC ACAGTCGTTC AGTGACAAAG GCTTGGGGCC GATCCCAAAA CGTTGGAAAG GGATGTGCGT GGACGGTGAA GATTTCGACT CGAAGAAGCA TTGCAACAAG AAGTTGATAG GAGCGAGGTA TTACATGGAT AGTCTTTTCC GTAGGAACAA AACGGATAGC CGAATACCGG ACACGGAATA CATGTCCGCA AGGGAAGGCT TGCCTCATGG GACACACGTG GCCTCCACAG CTGGGGGATC CTTCGTCTCA AATGTGAGCG ACAACGGGTT TGGAATGGGT ACAATAAGAG GTGGAGCCCC TAGTGCTCGT ATCGCGGTTT ACAAAGTGTG TTGGCAAAGA GTAGACGGCA CATGCGCAAG CGCAGACATA ATCAAAGCGA TGGACGACGC CATAGCGGAT GGAGTGGACT TGATAACGAT CTCAATAGGC AGGCCGAACC CTGTGCTGAC TGAAGTTGAC ATGTATAATC AAATCTCGTA TGGAGCATTC CATGCAGTCG CCAATGGCAT TCCCGTGCTC AGTGCGGGTG GAAACTTTGG GCCTGGGGCT TACACCGTCC AAAACATAGC TCCATGGATC ATAACAGTGG CTGCCACCAC TCTAGACCGG TGGTATCCCA CACCTTTGAC ACTAGGCAAC AATGTGACCT TAATGGCACG GACCTCGTAT AAGGGCAATG AGATTCAAGG AGATCTAGTG TACGTATATA GCGCAGACGA AATGACGAGT GCGACAAAGG GAAAAGTGGT GCTAAGTTTC ACGACTGGAA GTGAAGAAAG TCAGTCAGAT TATGTACCTA AACTTTTAGA GGTCGAAGCT AAGGCTGTAA TTATTGCCGG CAAAAGAGAT GATATTATCA AAGTATCCGA AGGTCTTCCC GTTATCATGG TAGACTATGA ACATGGATCT ACCATATGGA AGTACATAAG TATCACTAGA TCGCCTACCA TAAAAATAAG TTCTGCCATC GCGCTCAATG GGCCGCTTGT AGCCACTAAG GTTGCTGATT TCTCAGGGAG AGGACCCAAT TCCATATCTC CATACGTTCT CAAGCCCGAT GTAGCGGCTC CAGGTGTGGC CATAGTGGCA GCTAGTACTC CAGAAGATAT GGGTACTAAC GAAGGAGTCG CTGCTCAGTC AGGAACTTCA ATGGCAACAC CAGTAGTTGC TGGTTTAGTT GCACTACTTC GAGCTGTGCA TCCTGATTGG TCTCCAGCCG CGCTTAAGTC AGCTCTCATC ACTACAGCTT CCACAACGGA TCCCTACGGA GAACCTATCT TCTCAGAGGG AATGACACGA AAACTAGCCG ACCCATTTGA CTTCGGAGGA GGACTAGTGA ACCCAAACAA AGCAGCCGAC CCTGGTCTTG TCTACGACAT AGGTGCAGAA GACTATAGGC TTTTTCTATG TGCTTCCGAT TATGACGAGA GACAAATAAC CAAAATATCA AAGACAAATA CGCCATATCG ATGTCCAAGT CCAAGGCCCT CTATGCTTGA TCTTAATTTG CCTTCCATCA CCATTCCATT CCTCAAGGAA GATGTGACTC TCACTAGAAC CGTCACCAAC GTCGGACCCG TTGACTCTGT CTATAAGCTC GTCGTTAGGC CTCCTTTGGG TGTCAAAATC TCTGTCACAC CCAAAACATT GCTCTTTAAC TCCAATGTCA AGAAACTCAG CTTCAAGGTC ATTGTCTCCA CAACTCACAA ATCCAATTCG ATTTACTATT TTGGGAGCTT GACTTGGACT GATGGCTCTC ACAAAGTCAC TATCCCATTA TCTGTCAGGA CACAAATGTT GATGTACTTC GACCAGTGA 
Length2289
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4652666.. 4655704
Download Sequence
A.thaliana
AGI-codeAT5G11940.1
DescriptionSubtilase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5 Ahg916294
8.544 Ahg937504
12.8062 Ahg947612
16.7332 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
17.3205 Ahg895302
18 Ahg905122
19.5192 Ahg486927 cation exchanger 4
25.0998 Ahg473700 transposable element gene
29.3939 Ahg487214 Cytochrome P450 superfamily protein
29.5466 Ahg337040
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression