Detail



ID : Ahg350509

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350509|fgenesh1_pg.C_scaffold_6001102
Sequence
ATGGCTAGCT TGAAACTGGG TTCTAAATCT GAAGTGTTTC ATCTAAGTGG TCACACATGG CTTTGCAAGA CTGGTCTTAA ACCCGATGTG ATGATCCAAG TCGAAGACCA AAGCTTCCAT CTCCATAAGT TTCCTTTGTT GTCAAGAAGT GGATATCTAG AAACTCTGTT TAGCAAAGCA TCTGAGACAA CTTGTGTTGC TCAGCTTCAT GACATTCCCG GTGGTCCTGA AACCTTCTTG CTTGTGGCTA AGTTCTGTTA CGGTGTAAGA ATTGAGGTCA CACCTGAAAA CGTAGTGAGT CTCAGATGTG CTGCAGAGTA TCTCCAAATG AGTGAAAACT ATGGAGATGC AAATCTCATC TATCTCACTG AGTGTTTCCT CAACGATCAC GTATTCGTAA CCTGGGAAGA TTCCATCAAA GCCTTGGAGA AATCATGCGA ACCAAAAGTG TTACCTCTCG CTGAAGAGCT TCACATTGTT TCTAGGTGCA TTGGTTCTTT AGCCATGAAG GCTTGTGCAG AGGACAACAC AAGTTTTTTC AACTGGCCAA TCTCACTACC AGAAGGAACC ACTGCTACTA CTACGTTTTG GAACGGAATA CAAACAAAGG CCACGAGCGA AAACTGGTGG TTCAACGATG TATCATCGTT CCTAGATTTA CCAATGTACA AAAGGTTCAT CAAAACCGTG GAATCCAGAG GCGTAAATGC GGGTATCATA GCAGCATCTG TCACACACTA CGCGAAACGG AATCTTCCTT TACTTGGTTG TTCTAGGAAA TCTGGTTCTT CTTCAGAGGA AGGGACTAAC TATGGAGATG ACATGTACTA TTCACATGAA GATCAACGAA GTCTCCTTGA GGACATCGTG GAACTACTCC CCGGAAAAAA GTGCGTTACA CAGACAAAAT TCTTGCTCAG GCTTCTAAGG ACATCCATGG TTCTGCACGC GAGTCAGGTC ACTCAGGAGA CTCTGGAGAA GAGAATTGGT GTTCAGTTAG ACGAAGCTGC TCTAGAGGAT CTACTAATAC CAAACATGAA ATACTCAGGT GAAACACTCT ATGATATCGA CTCTGTCCAG AGGATTCTTG ATCACTTCAT GTTGACGTTT GATTCAAGTA TCGTTGAGGA GAAGCAAATG ATGGGAGATT CTCATCCTCT TAAGTCCATC ACAAAGGTTG CTAGTCTGAT AGACGGCTAC TTAGCAGAGG TGGCATCTGA TGAGAACTTG AAACTATCGA AATTTCAAGC ACTCGGTGCT CTAATCCAGG AAGATGTGAG GCCAATGGAT GACGGTATCT ACCGCGCAAT AGATATTTTC ATCAAGGCTC ATCCATGGCT AACAGAGTCA GAGAGAGAAC AGTTGTGCCT GCTGATGAAC TGCCAGAAAC TATCATTGGA GGCATGCACA CACGCAGCAC AAAACGAGCG TCTACCGTTG CGGGTCATAG TACAAGTCCT GTTCTTTGAA CAGATGCGGC TGAGGACATC TATAGCAGGA TGGTTATTCG GCTCGGAGGA CAACAATGAC CAAAGCGGCG CTTTAGAAGG ACACAAGAAC AGAAACGCAA ATATGGCGAT GCATGGGATG AGAGAACGAG TGTACGAGCT TGAAAAAGAA TGTATGAGCA TGAAGCAAGA TCTTGACAAG CTTGTCAAGA CAAAAGAAGG ACGCAACTTT TTCTCTAAGA TATTCGGATC GAGATCAAAG ACTAAGACTT CACCATGCGG CAAAGGAGGT GAGGACGCTC TAATGATTCC TGAAACCAAA ATCTGA 
Length1776
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5283509.. 5285567
Download Sequence
A.thaliana
AGI-codeAT5G13600.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.56776 Ahg949194
8.94427 Ahg899966 Putative membrane lipoprotein
10.247 Ahg898066
11.4891 Virus1531
12.4097 Virus0447
12.6886 Virus0440
13.2665 Virus0351
17.0294 Ahg919506
18.8944 Ahg923737
23.1517 Ahg939045
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression