Detail



ID : Ahg350903

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350903|fgenesh1_pg.C_scaffold_6001496
Sequence
ATGTCTGATG GAAGTAAGAG GGAGCCTGAA GATGATGTTG ATACTAAAGT GAGTCTTAAG AAGCAGAAGG AAGACGTGAT TGCTGCTGTA CAAAAGCTAA GAAAGTTCCA GCCAAGAAGG CTGCAACCAA GAAGCATGCT GCGGCTGCTG CTAAAAAGGC CAAGGTCTGA GAGTTCGTCT GAAGATGATT CATCCTCTGA TGAGGACTCA GATGATGATT CTGAGGATGA GAAGGCTGTT GCTACCAAGG CTGCAAGCAG TTCAGATTCA TCTGATGAAG ATTCTGATGA GGAAAGTGAA GATACTACTG AATGTCTTCA TGGTGCAATT GTTGTGGAGA AGATGCGTAG GTGA 
Length354
Protein Sequence
Protein Residue
Map Locationscaffold_905: 2652.. 3358
Download Sequence
A.thaliana
AGI-codeAT1G48920.1
Descriptionnucleolin like 1
TAIR curator summaryEncodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.
Alias[ATNUC-L1][NUC-L1][PARL1][nucleolin like 1][PARALLEL 1]
Gene coexpression
MR
MR Locus Description
4.58258 Ahg905978
8.24621 Ahg497390 Plant self-incompatibility protein S1 family
12.3288 Ahg903465
13.8564 Ahg931967
14.6969 Ahg917385 Cystatin/monellin superfamily protein
19.5959 Ahg948577 F-box/RNI-like/FBD-like domains-containing protein
22.3607 Ahg952483
23.0434 Ahg914958
28.3725 Ahg916425
32.665 Ahg923550 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression