Detail



ID : Ahg352687

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352687|fgenesh1_pg.C_scaffold_6003280
Sequence
ATGGAGCAAA AACCAGGATT TGGATTTCGA CCAACGGATG AGGAGCTGAT AAGTTATTAT CTGAAGAACA AGATTTTGGG AAACACATGG CTCGTCGACG ACACTATAAA CGAGATCAAC ATACTAAATC ACCATCCCTC TTCTTTTTCA TTTACGAAAA TTAAAGATGA GAGTGGAAAC AAGATTGGGA AAAAACGAGG TATTTTGTTC GATGACCTTG ATGCTCCTAA AGCCAAAGGG GAGAAGAGTT CTTGGGTTAT CCATGAGTAT CAGATCACTT CCTTGCCTCA TCCTAATCTG GATTCCTATG TTCTCTACAA AATATTTGAT AACAATAGTA AGAAGAAGGC AGACATTTCA AATGGTAATA GCTCAAGTGA TCCAAGTCAA TCTTTGGTTT TCGATATGAA TACAATCAGA GTGACTACTA GCATACCACC AGAGGTGAGT CCTGTTTCTG TAGTAAAGTA TAAGGGTGAA GCTGCAGACA TTTCATATGA GCCAAGTCGC TCCGATTCGA ATACTACCAG AGCGATTAAC AGAGCGGCTG AGCCTGAGCT TCAGGTTGAG CAGCCAGGTA GAGAAAATTT CTTGGGTATG TCTTTAGATG ATTTGGAACA AGAGGATCCA AAAACTTGCT TGCAGCCACA AGGTCCTCAC TTAGCCTTGA ATGATGATGA GTTTATCCGT GGATTGAGGC ATGTTGATCG AGAACAAGTT GAATATTTGT TCGCCAATGA AGAAAACATT GATGGTTTGT CTATGAATGA CTTGAGAATC CCAATGATCG TCCAACAAGA GGATCTCTCT GAGTGGGATG GATTTAATGC AGACACGTTT TTCAGCGACA ACAACAATAA CAACAACCTT AACGTGCATC AACTAACGCG TTACGGAGAT GATTATCGGA ATGCAGGTTA TAACGGAGGG AATTTTGAAG GCGTGCATCC CTATCAAGAA TTAATAATGC AAGAGAACCG CAACGATCAC ATGCCAAAGA AACCTTTGAC AGGGACCATT GATTATAGCA GCGATAGTAG CAGTGATGCT GGATCGATAT CTACAACGGT AACACACATC ACTCATAATG GAGGGAACTT TGAAGATGTG TTTTCTGATC TAGAATTCAT AATGCAAGAG AATCACAACG ATTACAGGCC AAAGAAATCT TTGTCAGGGA TCATTGTTGA TTATAGCAGT GATAGTGATA GAGATGCTGT ATCGATATCT GCAACGAGTT ACAAAGGAAC ATCAAGTCCA GGTGATAGTG TTGGTAGTTC AAATAGGCAC TTTCTCCAGA ATTTCGGAGG TGAGATTCTA TCGTTGAGCA AAGATACACA AACTTCTGAT GAACCTTTCA TCAGTAGAAA GACCCGGGAA TCTCAACTCG CACGGTGCAC CAAACCATCA AAACCAGAGG TTACACAAGG TATGGTGAAG ACAGAGAAGA AGGGCTTGTT TATTACAAAG GAAGCAATGG AGAGAAAACG CGAGAATTCA CCGTATATCT ATCTCATTAA CATGATCATA GGCTTCGTCC TCTTTCTGGC TCTCATTAAC GACATCATAT CAGTTTAA 
Length1578
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22740801.. 22745663
Download Sequence
A.thaliana
AGI-codeAT4G01540.1
DescriptionNAC with transmembrane motif1
TAIR curator summaryEncodes a membrane-bound NAC (for NAM, ATAF1/2, CUC2) transcription factor, designated NTM1 (for NAC with transmembrane motif1). NTM1 regulates cell division in Arabidopsis.
Alias[ANAC068][NTM1][Arabidopsis NAC domain containing protein 68][NAC with transmembrane motif1]
Gene coexpression
MR
MR Locus Description
26.2488 Ahg337771
31.9844 Ahg488616 Glycosyl hydrolase superfamily protein
33.0908 Ahg942261
52.9906 Ahg894843
83.7317 Ahg947825
90.2441 Ahg907586
90.5538 Ahg931106 senescence associated gene 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression