Annotation |
Description | jgi|Araly1|354097|fgenesh1_pg.C_scaffold_7001270 |
Sequence |
ATGGCGGAAT CAATATCAGA CTTGGAAGAT CAAGGAATGA TGGTGGACGG AGGGAATAGA GATGTTGAGG TGGAAAATAT CCCAGTGATG GCTTTCAGAC CATCCCACGA AGCTAAGCTT AGAGAATTGT TGCATAAGAT TTGCTTATAT GAGATTAAGC TATGTTCTGA TGCTGCAAAA GAATTTGTTA AGTTACTCAA GGGAGAAACT GGCGGCGATT TGTTGCGTCT TTATTTCCAG AACTCACCCA ACTTTGCTGA GCTTCTGGAG GCATGGAAGC TTCGACATGA AAAACAAGGA CTGTCCTACA TATTCTCGCT TATCCAGACG ATTTTGAGTC ATCCAGATGG AAAAGATAGA TCAACTGATA TAGGAAGAGC TATAGACCAG TTTGGTAGGT TACTTATTGA AGATAAACTG GATGACATTT ACAAAGAATT GAACAGAAAA GAGGGAAAAC AACAGTCTGC TGCACTTTCA TTGTTAGCTT CGATTGTTAG ACGTGGTCCA GGCATGGCAT CAGAAATAGC TAAGAAGTTT GATTTTAAGA GTTTTGCAAA ACTAGCAGAG TATAAAACGC GAGGGACTGA AAAGGTTAAG AAACATTCAA CAAGGAAGGC CTTTGTTGGG TTTGCAATAT CATTCCTTGA AGTTGGGAAG CCTGGATTGC TAAGATCAGT TTTGCAGCAG AAAGAAATGT ATTCGAAAGT CCTGCGGGGC CTTGGGAAAG ACGATGAAGA CACTGTGGCT TCTGTCTTGT CTACGTTAAA GGATAAGATC CTTGTTGAAG AATCATTGAT TTCTCCTGGT CTAAGGAGTG TTCTTTTTGG AAGTGCGACG CTAGAGCAGC TAGCCAGCAT TTCAGCAAGA GAGGATGGTG GGATTGTGAA TGAGTTGGCC CATGATGTTC TTGTTAAAGT TTGCACAGAC CCCTGTAATG GATTAATGCC AGATGCAAAG AGAAATTTGA GAGGCAATTC AGACAGACTA CTAATGCTCA TGAAGAGGTT GAGAGCAGCA GAAATTGGTT ATCACAGGGA TTTGCTTCTA GCCATTGTTA GGGGTAGACC GTCTTTAGCT TCAGCTTTCT TGGACGAGTT TCCATACAAT GTGGAAGATT TTGCATCACC ATCCTGGTTT TCTTCTATTT CCGTGGCAGC AAATTTGGTA TCGTCAGTAA GAATTTCACC TTCTTTTGAC TTTCTCAATC CAGATCATCG TGCTATACCT CCTTCTGGTG GTTCGGATGT TCAGACTATC ATGAAATGCA TATGCCCCCG ACCATTTAGC CGGTCACTGA TCACTAAAGG AATGCTCCAT TCTGATTTTC TTGTGAAACA TGGGACCTTG AGATTTCTCT TGGAGACGCT GAGGCTGTTG GATTCTTTTG TTACTGCTTG GAACCTTTGT TCATCTCATA GATGCTCTGT TGAGCGGAAC GTCATGGGTG AAGTGAGCAG CTTTTTTCCA GATTCCCAGG TCTTATTGAT TGTACTGAAG TCTTTGGACG GTTCTAGTGG AACTCAAAAG CTGTCATTGA AGAGAGAAGC AGAGTTGGAT AGTGGATTAG TAGGCAGAAA AAAACGCTTT AAGCGATCTG ATAAGGATGT TTTGGAAGAA GAGGCTGGTG ATATTGTCAT TGGTGGGGTA GGTTCTGATA AAGATATCTT TTTGGCAGAG GATAATATGG ATGCTCATAT GACAGATCAG GAAGATGCTG AAAAAGAATA TCTTGGGATT GTTTCAGAAA TTTGGGTTTC AGAGCTCTGT TCTAAGCCTA TTGATTCGGT CGAAGAAGCA GAGATGTGTT TTCACATAAA GCTTCTGGAT GCCCTCAAGA TTTATGTGCG TGCTGTACCT AATGAGCTTG AAGGATCGTT TGATGTCTTC ATGAAATTTC TGAGCAATTC TTCAGGTTTG CCAGTTGAAT TGCAGAGAGC TCTCTTGTCT TTGCTAAATG AGTACATCAG TTGGACGCCA AAGTCTCAAA GTGACAGAGG TCCTACAAGA ATTCCACCAC TTATGCACAA GCATTTGCGT GTGTTCATGA ATTTGTTACT TTCTTCACCA CACAACGGGG TGAAGGATCT AGCGTACAAT TTAGCAGTGG CAGCTATGAA CAGTACCGGT GCATTTGAAA ACAATCCAAG TGAAATTGGT GCATGGTTCT TGTTTCTACC ATGTTTTGAA AAGATTAAAC TACCTCATGA GGTTCAGGAG GCTGTACAGA GCATGTCATC AGTTGTCATC TCCTTTTTAT GTGATGCAGT TTCGACTGTT GGAAATAATT TATTCAAGCA CTGGGACATT GTCAGAAGTA GCTTGTCCCA TTTAAAAGGT GTATCAATTG GTTTTAGCCC CCTAATTATT TGTCTACTAC AGAAGTGTGT GAGGCTACTA AATTCTGAAT CTAAAACGTC TTTACCGGAG AAGTCAGCAA TATCTCTGTA CGTCTGCAGC ACACTGAAAT ATCTTTTGCA AACTCAGGTA GATTCCAAAT TACTCTCATG TTTGATCCAG TCAGTTTTAT CTGAGGTGGT TGATGGATCT AAGGATTCTT TATGTGAATG GAGGCCATTG AGAAGGTTGC TTCGTTTCTC ACAATCCTTG TCAAACGAAA AACCTATCAT CTTGCATTCC AGAAGGACAA CGGGTCTTCC TACTGATAGT ACTTTTACAG AGACTCTTGA TGAGATCAAA AGACTAGTTA GAAGCATTTC TCCGGATGAA ATTGCAGGAA TAGTTAAAGC GTTTTCTTCT GCATTGATAT GTGCAACACC TGAATCGATC TTGCAAAATT TTGCTCCTGT GATGGATGTT TCTTGGGCCT TTTATGGAAC ACCATTCTCA TTTTTACAGT CCATCACCTT TCTAGAGGAA AATTTCCTTG GAAACCTTTC AAAACTATCG CCTGACTTGT TTGCTCCAGG TTCAGAATTT ACTGGGTCAA GGAATCTGTG TGAAGGAACA GTAGATAGTG AGATTGATTT TTCTGGCCAC TCGTCCGTAA CTGAAGAAAT CAGAAGTAAG ATGAACAATT GTGATATTGA ATCTTCTGCC TTCTCTATGT TCTTAGAGCA GGCTCCTTTT CCTGTATTAC TTAACGCAAT TATGAGCATG GATATATCTT GCTTACCAGA GTTTCCAAGA ATATCAGAGC TACTCCTGCT AAAAGTTTCG CAGCCTAAAA GTGGTAGTAT TGACTCAAAT ATCAAATTAA TAATGTTCTG GCTCTTCCAA ATACGATCAT CTTACAAGGT TCAACCAGCT CCAGTACTCC ATCAACTCTC TGAGATCTGC TTACATCTCA TGAAGAACTT GTTCTCTCAA ATATCAGAAC CGGAGCTTGT TTCTGGATCC TCTTCAAATA AGTTGTTTGC TTCTTTTGCA AAGTGGAAGC ATCAAGTGGC CCTGACAGTT CTTTGCCACC CAGTTGTGAT GGCACTGTTA GAGAGTCCCT TGGATTGTGG CACATTACCT CCAGTGCAGA ATGTTGAGAT TTTTTCAGAA ACATCGCTGA CAACGGGCAG GCTAGTATAT AGTGAAATAG ATCAACACAT CCTTGATCTT TTGGTTTCTA CTTGTGAGCA CTTTTTGCTT GATGAGAAAC ACAATCTGTG GAAAGAGGAC CTCAGGGAAA ATAAGTCAAT TATAGCGTTT AAGGACTTGG TTGAAAGGCT TCTCTTGGAA TTTAGGGTCA AGTTTGAGCT TTGTGGTTGT TCTCAAAGTT ACGCTTCTCT TCTCCAACCA TCACAATTGA TTCATGCTTT GTTAAGATTT ATATCACCTT TTAAACTTTT TATTATTGCT CATTCCATGC TGAGTAAAAT TGATGAGGGA GGGTTGGCAA GCCCAAATTC AAGTATTCTT CTCAGTTTGG GATTGGGTAT TGCAGGTGGA GCTTTTGAAA TGCTTGTATT ATATTCACAC CAGCCGACTG CTAAGAGAGG GGTATATGAT TTGCTGTGGG AATTAGAAGA AAAGAATTAT GCCAGTAACA TCATTGAGAA AGTATATAGC ATGGCATGCA AGTTTTCTAC CTCTCTTGAT TTGGATTCGG CAGATATTTG TTTGCTTAAA GTTTGTGGTG GTATTTTCAG GGGGAAACAT AATCAAAATT ATAGTGTTCA CCCGTTGGTT TTGAAAATTT CACTGATTGT TGGAAGAACC CCTGAAGACT TGATTATCCA TTGCATTAAC CGGGCAAGCA TAACCAGAGC CAAAATATTG TTCTACCTTG TGGAGTCCAG TCCCTTGCAT CTGTTAGTCT TTGGAAACTT TTTCTTTAGC ATGCTAAGTA AGAAACAGGA TGTCTCTGCG CTTACAGATG ATCAGTTTAT CATGCTCCTG CCTGCTGTGC TATCGTATCT GACATCAGTT TTTGCAAAAC TCGAGAAGCC GTTTAATAGA TGTTTGGATA TAACTTCAGT TTATTCAAAT ATACTAATAA ATGGTTTTCT TCAGTGGCCG AGGTTTTTGT CTAGGTGCAT CTTTGAAGAG AAGTATGAAG AGATTCTTCT GTCAACGACT GAGGATATGG ACACTATGTT TAATGCGAGT CTTATTGGGA AGGCAGTACG TATGTTTCAG TACCACTTTT CCTTGACTGA AAGTCCAACT AAAGAAGATG ATCTCTTTAA GGTATTTGAT TCCATGTTTC CTCACACTAG TACTGGCAAG GAGATGTTGG ATTACGAGAT AAAGGAAGTG GACGTTCAGT CAGTAGACCA AATGTTAAAT GTTGCTATCC GTGTGGTTGC AAAAGTAACA CTTTCAAGGA TTTGCTTGTT TCCTGAGGAT AGCAGTTTGT GTCAAGTTAA ACGTGCAGCA GGTACTTGTG TGAAGAAAAG TTCTTCAAAA ATTGGATCCA ATAGAGCGAT TTTATCAAAC CCGTTGCTAG ATGCTTTAGT TAATAGTTGG CAATGTGTTG TCAAGAAATC TGATGGATCT TTCAAAGGGA ATTCTGAAGG AAAACAGGAC AAATGTTGGT CCTTGTGCAA AAGCCTTGAA AACTTCATTT TGAGAAGTAT TCTACAGTTT TTGGAAAACA TGTGTGAGGA GCTCGTTCAG TTGGATTCCC TTCCCTTCCT GGAGAGATTG ATGAAATCAG TGCTTCTGTA TAGATTTGAG GACTCGAAGA CACTGAAGAT ACTGAGAGAA ATTTTCTCTT TATTGTGTAG AGGGAAGTAC TCATATGCAC CATATATCCA ACTCTTAATA TCTCACTCTC AGTTTACACC AACTATCAGT TCTCTCTCCA TATCATCCTC ACATACTGGT GAATTATTCA GGCCTGTCTC CAGCATCCTA AATCATCTTA TCATCTCAAG TCCGAATTCT GTCGGTGTTA AAAGGTGTTG TCTCGAAGCA CCTAACTATG CGAAGCAGTT AGAAATTGTC AAAATTCTCA GAGTGCTGCT CTTCAAATGT GGAAAAGATC CAGGCATCAA TCTCAAAGAA CTGCATTTTT TTCTTTTGTG TTCTTATGGT GCAACTCTGA GCGAAATCAA CTTGGAGATC TACAAGCTGA TGCATGATAT CAAGTTGATT GATGCCGAAC AGACACTAAA TGTTTCTGAA ACAGATTTGT GGGGTAAAGC TGCCTTGAAA TTAAGAGAGG GACTGCGTTT CAAACAGGAT GCATCTAATG TTGGTCAAGC TGAGTTAGTG GAAGATGTCC AGCAGAGTCT TTTTAAAGAG AATCTTTGTG TTGATCCCAA AATCTGTGCT TCAACTGTTT TGTTTTTTCC TTATCAACGG ACTACAGAGA AATCGGACAA TTTTTACCTA TATGATGATC CAATAAACGA GAAATGCTCA CCTGTTATTG AGGACATTGA ACGATATGAT CCGGCTTTCA TCCTGCACTT CTCGATAGAC TCATTGTCCG TGGGTTACAT TGAACCTGTG GAATTCGCCA GCTTAGGCTT GCTTGCAGTT GCATTTGTGA GCATGTCTTC AGCAGATCTT GGGATGAGAA AATTGGGTTA TGAAACTCTT CAAATATTTC TGGATGCCCT TGAGAATTGT AGGAAGAACA AGCATGTAAC AGGGCTTAGG CTTCTGCTAA TGTATGTACA AAATGGAGTT GAGGAACCAT GGCAAAGAAT CCCAACTGTT TCTGCTATTT TTGCTGCTGA GACATCTCTG ATATTGTTGG ATCCTTCTCA CGAACATTAT GTTCCCATAA ATAAACTTTT GCAGAGTTCA TCTACACTGA AACTGAGGGG AATACCTTTG TTTCATGATT TTTTCTGGAG CAGCGCTGTT AACTTTAGAT CGCAGAGGTT TTGGGAACTA CGCCTAGTGT GTCTGGGCTT GAAATCAGAT GATGATGTTC AAATTTACAT TAAAAACTCC ATCCTTGAGA CAGTGATTAG TTTTTCCTCA TCTCCTCTTG CTGATGATGA AACTAAAAGA CTAATCCTTC AGGTTGTGAG AAAGTCAGTC AAATTCCATA AGATGGCCCG ACATCTAGTT GAAAACTGTG GTCTGTTTTC ATGGTGTTCA TCGTTTATCT CAAATTTTAC TACAAAGCCG ATTGGAGACA AAGATCTGCA CTTGGTAGTT GTCTTGGAGA TCATAACTGA TGTTCTCGCC TCCAGAAACA TTACAGAGTG GTTGCAACGA TTTGGCCTCG AAGGGCTAAT GGAAATCTCA TCGCGTTTAT ACAAACTTTT AGGTGGTGGC TTGGTATCAG TACAAGCAAA TAGTACTTCA GTTGATTTAA TTTTGCAGAT ACTATCTGCT ACTCTAAAGA TTTCACAGAA ACGAAAAATG TACCAGCCAC ATTTCACCAT CACAATCGAG GGAATATTCC AACTCTTTGA GGGTGTTGCT AATTTTGGTT CTCCTCAAGT CGAAGCTAGT GCAGAGAGTG GGCTTATTAC TATATTAATG AGCACCCCGC CAGTTGACAT AATATGCATG GACGTGGACA AGCTGAGAAG GTTTCTTTTG TGGGGAACCT CCACAGCATT AAAGAGTGAC CTTAAAAAGG GATCTAAACC TATTGAGTCT CATCAAGATA CTAAAATACT CACCGAAGAA CCACAAGAGG AGACTATGGT AGCAAAGTTT CTACGCTGGC TGTCGGCTTC AGTTATTCTT GGGAAGCTTT ATTCTAAAGC TAGTGATTTT GACCAGACAG TCTTAAGTAA AACAAAACCA GAAACTTTGC TGACATTGTT AGAATACTTT AAGAAAAGAA ATCTCAAAGA CAGCATGAAA AATTCAGAGA ACATAATAGG GGAAGTAATT GTACACCTCC AACAGCTCCT GTGTACAAAC TACAGGGTTC TTCTTCCCTC TGTTGTATTT GCACTTTCTC TCATGCTTCT TCACAATGAC CTCGGGACTG GAGAGTCCGA TGGCGATTAC AAGCTCAGAA AATCTTTGTG TTCTAAAATT AGTAGTCCTC CTGAGGCTAT TCCGGGCTGG AGATGGTCAT ATTGTCAAGC GTGGAGGGAT CTTTCATCAG AACAAGCCAC AGATCTGGAT AAGATCAATG AACTCCATGC GTGCCAACAC CTTTTGCTGA TATTCTCTGA TATGCTTGGA GAAACGCCAT GGGAATCTCA ACAGATGTTG CCTCGTAAAA GTTTTGACAT GTCACATGTA TTCGAATGGG AAAGAAGTTT AGTTGAGACC TAG |
Length | 7653 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_7: 5957017.. 5967010 |
Download Sequence |
|
A.thaliana |
AGI-code | AT4G27010.2 |
Description | |
TAIR curator summary | |
Alias | [EMB2788][EMBRYO DEFECTIVE 2788] |
Gene coexpression |
MR |
MR | Locus | Description |
3 |
Ahg486246 | Domain of unknown function (DUF1726) ;Putative ATPase (DUF699) |
6 |
Ahg496683 | |
6.7082 |
Ahg325654 | transducin family protein / WD-40 repeat family protein |
7.4162 |
Ahg313639 | nuclear RNA polymerase A2 |
7.54983 |
Ahg476308 | Ubiquitin carboxyl-terminal hydrolase family protein |
8.544 |
Ahg489610 | NOP56-like pre RNA processing ribonucleoprotein |
9.64365 |
Ahg496275 | LYR family of Fe/S cluster biogenesis protein |
10 |
Ahg938710 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
10.3923 |
Ahg926900 | flavodoxin family protein / radical SAM domain-containing protein |
12.2474 |
Ahg470480 | HIT-type Zinc finger family protein |
|
RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
|
Growth Chamber expression |
|