| Annotation |
|---|
| Description | jgi|Araly1|313639|fgenesh1_pm.C_scaffold_1002419 |
| Sequence |
ATGGTTGTCA ACGCGAAAGA CTCGACGGTT CCAACGATGG AAGACTTGAA AGAGCTTCAC AATCTCGTCA CTCATCATAT AGAGTCTTTC GATTACATGA CACAGAAAGG ACTCGATGTT ATGTTCAATC GAATCAAACC CGTTTCTGTC TACGATTCAA ACACCGAGAA CGAATTGAGC AATATCCTTT TTTTTATGAT ACTTTGGTTA GAAAATCCTG TAGTATTCGC TCCTCAGAAA GAGAGTTTTA GATCAACATC AAGGAAAGAG CCTTTGCTTC CCTTTGAGTG TAGGCAAGCG AAGATTTCGT ACACAGGAAC GTTTATGGCT GATGTTTGCT TTAAGTATAA TGATGGAGTC GTTGTGAGAG ATAGATTTGA TTTTGGGCAA TTTCCTATTA TGCTCATGTC AAAGCTTTGT AGCTTAAGGG GTGCTGATTG CCGGAAACTG TTAAAGTGTA AAGAGTCAAC TTCTGAAATG GGAGGGTACT TTATTTTGAA TGGGATCGAG AGAGTGTTCC GATGTGTTAT TGCACCAAAG CGGAACCATC CAACAAGTAT GATTCGGAAC TCATTCCGTG ATCGTAAGGA AGGATACACT GAAAAGGCAG TTGTCACTAG GTGTGTTAGG GACGACCAGT CATCTGTCAC TGTAAAACTG TATTACCTTC GCAATGGAAG TGCCAGAGTT GGATTTTGGA TAGTGGGAAG GGAATATTTG CTTCCTGTCG GCCTTGTTCT CAAGGCTCTC ACGAACACCT GCGATGAGGA AATATACGAA AGCCTGAACT GTTGCTACAG TGAGCATTAC GGAAGAGGCG ATGGAGCTAT TGGAACCCAA CTTGTTCGTG AGAGAGCCAA AATTATTCTA GATGAAGTTC GAGATTTGGG TCTTTTTACC CGTGAACAGT GCCGGAAGCA CTTAGGACAG CATTTTCAAC CTGTTCTTGA TGGGTTAGAA AAAGAAAGCC ATTCTATCGT TGCTGAAGCT GTGCTCAGGG ATTATTTATT TGTTCACCTT GACAATGATC ACGACAAGTT CAATTTGCTC ATCTTCATAA TTCAGAAGCT ATATTCTCTG GTGGATCAGA CTTCTTTACC TGACAATCCG GATTCTTTGC AAAATCAGGA AATTTTAGTC CCAGGTCACG TTATAACTAT TTACCTCAAG GAGAAACTTG AAGATTGGCT GCGGAAGTGC AAAAGTCTTC TTAAAGATGA GTTGCTTAAC ACGAGCTCGA AATTTTCCTT TGAAAGCCTT GCTGATGTCA AGAAGCTTAT TAACAAAAAT CCTCCCAGGA GTATTGGCAC GTCAATTGAA ACATTGTTGA AGACAGGAGC GTTGAAAACA CAGTCTGGTT TGGATTTACA GCAGAGAGCA GGTTACACTG TTCAGGCTGA GAGATTGAAC TTTCTCCGTT TCCTTTCATT TTTCCGGGCG GTTCATCGAG GTGCTTCTTT TGCTGGGCTT CGTACAACAA CTGTGAGGAA GCTGCTTCCT GAATCTTGGG GTTTTCTTTG CCCTGTTCAC ACTCCTGATG GAACACCTTG TGGATTACTT AATCATATGA CTTGTACTAG CCGAATTACT TCTCAGTTCG ATTCCAAAGG AAACATCAGA GATTTTCTGA AAATAAGAAA GTCAGTTGTT GAGGTTCTTA CTGGGGCGGG TATGGTATCT TCATTGCCAA AGCTAGTACG AGCTGGACCA CCAAAAGTCA TTCATGTTCT TTTAGATGGT CAAGTTGTAG GCACGCTATC TTCTAACCTA GTCACGAAGA TTGTCTCTTA TTTGCGGAGA CTGAAAGTGG AGGCTCCTTC AGTGATTCCT GAAGACCTCG AAGTGGGATA TGTACCTATA AGCATGGGTG GATCTTACCC TGGATTGTAT TTGGCATCAT GTCCCGCAAG ATTCATTAGG CCGGTTAAAA ATATATCTAT ACCTTCTGAA AATATTGAAT TGATTGGACC ATTCGAACAG GTTTTTATGG AAATAAGCTG TCCTGATGGA GGAAATGGAG GAAGGAATAA CTCTTCCCCA GCAACTCATG AGGAAATTCA TCCAACTGGG ATGATAAGTG TGGTTGCTAA TCTTACACCT TGGTCAGATC ATAACCAAAG TCCGCGTAAC ATGTATCAGT GTCAGATGGC GAAACAAACC ATGGCATACT CTACTCAAGC ACTCCAATTT CGTGCCGACC AGAAGATTTA CCACCTGCAG ACTCCTCAAT CCCCTGTGGT CCGCACAAAA ACATACACCA CTTACAGTAT TGATGAGAAT CCTACAGGGA CTAATGCAAT AGTTGCTGTC CTCGCACATA CAGGATTTGA TATGGAAGAC GCGATGATTT TGAACAAATC ATCTGTGGAG CGGGGAATGT GCCATGGCCA AATATACCAG ACAGAAAATA TTGATCTGTC AGATCAGAAT AGCCGATATG ATAGTGGTCA TAAAAGTTTT AGGAGGAGTA CTATTGACAA ATCAGATCAT TCTCGTATCG ACGCTGATGG GTTACCATAT GTTGGACAGA AAATATATCC AGATGAGCCG TATTGTCGTA TCTATGATGA GGTAACTGGC AAGCAAAGGC TCTTGAAGGG AAAAGGTACC GACCCTGTCA TAGTTGACTT TGTCTCTGTT GACATGAAAA GCAAGAAACA TCCTCAAAAG GCGAATATTC GATTTCGGCA TGCCAGAAAC CCCATAATCG GTGACAAGTT CAGTAGTAGA CATGGGCAAA AGGGAGTTTG TTCGCAATTG TGGCCTGATA TTGAAATGCC ATTTAATGGA GTTACTGGAA TGCGTCCAGA TCTCATCATT AACCCGCATG CTTTCCCATC AAGAATGACA ATTGCTATGC TTTTGGAATC TATTGCTGCT AAGGGAGGTA GTTTGCATGG AAAGTTTGTA GATGCAACGC CGTTTCGCGA TGCAGTAAAT AAAACAAATG GAGAAAAGGA AAGCAAGTCC AGTTTGCTTG TTGATGATCT TGGTTCCATG TTAAAGGAAA AAGGATTCAA CTACTATGGG ACCGAGACAT TGTATAGTGG GTCTCTAGGA GTAGAGCTGA AGTGTGAGAT ATTTATGGGG CCTGTTTACT ACCAAAGACT GCGTCATATG GTCTCAGACA AATTCCAGGT TAGATCTACG GGTCAAGTGG ATCAGCTAAC TCATCAGCCA ATAAAGGGAA GGAAACGAGG TGGAGGGATT CGATTTGGTG AAATGGAACG AGACTCACTG CTTGCTCATG GAGCTTCCTA TCTATTACAC GACAGGCTTC ATACTTCTTC AGATCACCAC ATTGCAGATG TGTGTTCTCT ATGTGGAAGC TTGCTCACAT CTTCGGTTGT GAATGTTCAA CAGAAGAAGC TGATTAAAGT TAATGGAAAG TTACCTCCTG GTAGAACTCC AAAGAAGGTA ACTTGCCATT CTTGCGGGAC AAGTAAAGGC ATGGAAACAG TTGCAATGCC CTATGTGTTC AGGTACTTAG CTGCAGAGTT GGCTTCAATG AATATTAAGA TGACTCTTCA GCTAAGCGAT AGAGGAGTAG CGGATGAAGA AAAATAA |
| Length | 3567 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 12508460.. 12515664 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G29940.1 |
| Description | nuclear RNA polymerase A2 |
| TAIR curator summary | Encodes a subunit of RNA polymerase 1 (aka RNA polymerase A). |
| Alias | [NRPA2][nuclear RNA polymerase A2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg494878 | |
| 3.74166 |
Ahg481268 | DNA/RNA polymerases superfamily protein |
| 4.69042 |
Ahg479746 | putative mitochondrial RNA helicase 2 |
| 4.89898 |
Ahg890991 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein |
| 5.74456 |
Ahg491436 | La protein 1 |
| 7.4162 |
Ahg354097 | |
| 8.66025 |
Ahg480636 | ribonuclease II family protein |
| 8.94427 |
Ahg913002 | DEA(D/H)-box RNA helicase family protein |
| 11.225 |
Ahg906059 | Transducin/WD40 repeat-like superfamily protein |
| 11.4891 |
Ahg493066 | eukaryotic translation initiation factor 4E |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|