Detail



ID : Ahg356517

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356517|fgenesh1_pg.C_scaffold_8000304
Sequence
ATGCTTCATA TGAGTATCGA ACGCCCTTTT ATGCTAGACA TCGTTAAAAA TGTTAAGTTT GCCCTAACCA AGGAATTAAC ACAAAGAGAA GAAAATCCTG AATTAGAAGG AGAAAAATCA GATGCCAAAG AAGGCGTCAA CAAAGATCCA AATAGAACTG AACCAGGAGA ACAACGTCTG AAGCAATTGG GAGAGAAATT GGATGTCGAG TGCAATGACA ACGAAACTCG TATTGTTGCA GTCGTCGGGA TGGGTGGAAT CGGCAAAACC TTTCTCGCCA AGAAATTGTT AGAAAAGCTG AAGAGGAAGA TTGGCAGTCA CGTGTTTATC GAGTCCGTGC GTGAAACTTC GAAGGCACAT GGATTCGATA AGCTGAAACT GCAAAAGACA CTCGTGGATG GTTTGCTCCC GAATGAAGAT ATAATTTGTG ATAATGAGAA TCCACTCGAG GTTTGGAAGG ATCATCTTCT TAAGAAGAAA GTTGCGGTTG TTCTTGATGA CGTGCATGGC AAGGAACAAG TAAATGCGCT TCTAGGGAAT TGTGATTGGA TTAAGAAGGG GAGCAGGATC ATCATCACTA CCCGCGACAA GTCATTGCTC AAAGGGGTGG AAATGGTCAG CGATATCTAT GAAGTCCCCG GGTTTAATGA CAGTGATAGC TTAGAGCTCT TTAGCACTTA CGCCTTTGAT GATAAATCAT GTAAGTTCAT GGAGTTGTCT AGAAAGTTTG TGGATTACAC TGGAGGAAAT CCATTAGCAC TCAAGGCATT GGGAGAGGAA CTTCTTGGGA AAGACAAGGG TCATTGGGAA GCAAGACTTG TAACACTTAC ACAACGTTCC AACGAGAAGA TCAGAAAGGA GTTGATACTC AGCTATGATG AACTGAATGA GCATCAGAAG GATGTTTTTC TCGATATCGC ATGTTTCTTT AGATCACAAG ATGAGAACTA CATTAAAACT TTACTTCACT GCAGTTTTGA CGCTGAATCT GGAGAAGCCG GGAAGGAAGT TAGAGAACTC AGTGACAAGT TCTTGATTCG TATCTCTGAA GATAGAGTAG AGATGAATGA TCTAATCTAT ACATTGGGAA GAGAACTTGC AATATCATGT GTTGAAACTA TAGCAGGGAA ATATAGGTTG TTGCCGTCGA ATCGTGAAGA GTTTATTAAT GCACTGAAGA ACAAAGAGGA AAGAGACAAG ATAAGAGGTA TTTTCCTAGA CATGTCTAAA ATGGAGGAAA TACCCTTAGA CTACAAAGCG TTTGTTGGTA TGAGCAATCT GCGGTACCTA AAAGTCTACA ATTCTCATTG TCCTCGACAA TGCGAAGCTG ACAGTAAATT AAACCTACCC GATGGTCTTG AGTTCCCTAT ATGTAATGTT CGATATTTCC ACTGGCTGAA ATTTCCAGTG GAGGAACTTC CTTGTGACTT GGACCCCAAG AATCTTATCG ATCTTAAGTT GCATTACAGC CAGATTAGAC AAGTCTGGAC TAGTGATAAG GCTACACCAA GACTGAAGTG GGTTGATCTC AGTCATTCGA GTAAGTTGAG TTCCTTGTTG GGTTTATCAA AAGCACCAAA TCTTTTGAGA TTAAACCTCG AAGGCTGCAC GAGTTTGGAG GAGTTATCCG GAGAGATATT ACAAAACATG AAGAATCTCA TTCTCTTGAA TCTAAGAGGA TGCACAGGTC TTGTGTCTCT GCCAAAGATC AGTCTATGTT CCTTGAAGAT TCTCATCCTC AGTGGCTGCT CGAAGTTTCA GAAGTTTCAG GTGATTTCAG AAAATCTAGA AACTTTATAC TTAAATGGCA CTGCAATAGA TAGGCTTCCT CCATCAGTTG GTAATCTCCA GAGACTTATC TTATTGGATT TGAAAGACTG CAAAAATCTA GAGACTCTTT CTGATTGTAC AAATCTTGGG AATATGAGAT CTCTTCAAGA ACTCAAACTT TCTGGTTGTT CAAAGCTCAA GAGTTTTCCC AAGAACATAG AAAACTTGCG GAATTTGCTA CTCGAAGGAA CAGCAATAAC AAAGATGCCA CAAAATATTA ACGGTATGTC TTTACTGCGA CGTTTATGCT TAAGCAGGAG TGACGAAATC TACACCCTGC AGTTTAACAC CAACGAACTG TACCATTTGA AATGGCTCGA GTTAATGTAT TGTAAGAATC TCACATCTCT TTTGGGGCTT CCACCAAATC TTCAATTCTT ATATGCTCAT GGTTGTACCT CACTGAAAAC TGTGTCAAGT CCACTAGCCT TGCTTATCTC AACGGAGCAG ATTCATTCTA CGTTTATTTT CACCAACTGC CATGAACTGG AACAAGTCTC AAAGAATGAT ATCATGTCTA GCATACAGAA TACAAGACAT CCGACATCAT ATGATCAATA TAATCGGGAG CTGCCTCGGC ATTGGTATGA AGGCAGAGTA AATGGGTTAG CTCTTTGTGT TGCTGTCTCG TTTAATAACT ACAAAGACCA AAACAACGGT CTTCAAGTGA AATGCACCTT TGAGTTCACT GATCATGCCA ATGTATCCTT GAGTCAGATA AGTTTCTTCG TCGGAGGCTG GACCAAGATT CCAGAAGATG AACTAAGCAA AATTGATTCG GACCATGTCT TCATCGGCTA CAACAACTGG TTCTATATAA AATGTGAAGA AGATAGGCAT AAGAATGGAT GTGTTCCTAC TAATGTTTCC CTTAGATTTG AAGTCACAGA TGGTGCAAGC AAGGTTAAAG AATGCAAGGT TATGAAGTGT GGCTTTTCTT TGATTTATGA GTCAGAGGGA AGTGAGAAGG TTTCTCGGGA CGCAACATTT GATGCAAACT CGAAGATAGA GGAAAGTAAA CTAAGTGAAA CAAAATCTTA CAAAACTGCA GAATATGATG CTGATTTCTA TGGTGAAGGG GCACAAGGGT TGGAGACTTT TGATAAGTTG ACTCTACTCA ACCCCTTAAT TAGCGAGGTG CATTAA 
Length2976
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2228078.. 2231316
Download Sequence
A.thaliana
AGI-codeAT5G45230.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
30.7409 Ahg894938
33.4813 Ahg890578 HSP20-like chaperone
35.242 Ahg480583 Mechanosensitive ion channel family protein
38.4708 Ahg947274
44.1588 Ahg896878 putative pentacyclic triterpene synthase 3
46.6905 Ahg493352 HXXXD-type acyl-transferase family protein
49.5177 Ahg923256
60.05 Ahg949069 transposable element gene
65.7267 Ahg483852 Protein kinase superfamily protein
69.4982 Ahg925390
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression