Annotation |
Description | jgi|Araly1|471477|fgenesh2_kg.1__1431__AT1G13220.1 |
Sequence |
TTTTGGGAAA TTAGGGTTCC AAAAATTTCG AACTAATGTT CACGCCACAG AGAAAACCGT GGATGTCACC GGCGATGACG CCGAGAAGCG AGAAGCATAA AATCGGCGGT GTTACTAACC CTAGAAACGC TGATAGAAAG GGAAAGGCGG TTGCTTTTAG CGATGACCTA GTGATATCGA CTCTCCCACC GCCTCCGATT GGAACACTGA CCGGAGAAGG CGTTTCTCGA GGTTACACTG ATGATATGGA TATGGGTGAT TGGAGAAGGT TTAGGGAAGT GGGTTTGTTG AATGAGGCTT CAATGGAGAA GAAAGATCAA GAAGCTCTTC TTGAAAAGAT CTCCACACTT GAAAAAGAGT TATATGGCTA TCAGCACAAT ATGGGGCTTC TTCTCATGGA CAACAAAGAG TTGGTTTCAA AGCACGATCA ACTAAATCAG GCATTGCAAG AAGCTCAAGA AATCCTTAAA AGGGAACAGT CGTCACATCT GTATGCGTTG ACGACTGTCG AACAACGTGA AGAAAACTTG AGAAAAGCTT TGGGTCTGGA AAAGCAATGT GTGCAAGAGC TTGAGAAGGC TCTTCGTGAA ATTCAAGAGG AGAATAGCAA GATGAGGCTG ACTTCTGAAG CTAAATTAGT TGAAGCTAAT GCTTTGGTTG CTAGTGTTAA CGGGAGATCT TCAGACGTGG AAAACAAGAT TTACTCTGCC GAAAGCAAGC TCGCAGAGGC AACTAGAAAG AGCTCCGAGC TGAAAATGAG ATTGAAGGAA GTGGAGACTC GTGAAAGTGT CCTGAAACAA GAGCGGCTTT CATTTGCTAA AGAGCGAGAA TCATATGAAG GGACTTTCCA CAAGCAAAGA GAGTACCTTA ATGAATGGGA GAAAAAGCTT CAAGAAAAGG AAGAAATAAT GACTGAGCAG AAGAGAAGCC TGAATCAAAG AGAGGAAAAG GTTAATGAAA AAGAAAAGAA ACTGAAGCTG AAAGAAAAAG AACTTGAAGA ATGGGATAGA AAGGTTGATT TGTCTATGTC GAAGTGTAAG GAAACTGAAG AGGACATAAC GAAACGATTG GAAGAATTGA CTACAAAAGA GAAAGAAGCT CACACACTCC AGAGCACGCT AGTGTCAAAG GAGAATGAGT TACGAGCCTT TGAAGAGAAG CTCATTGCTA GAGAAGGGGT AAGTTTAAGG GTATAGCTTT TGTAGATTGT AGTTGTTGAA CATTTTTATA CACTGGAAAT ATAAATATTT AATGAAAGTA ACAGCATTCT CATAATAGGA ATACTGTTAT GCACTGGATA TC |
Length | 1302 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_1: 5245211.. 5247154 |
Download Sequence |
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A.thaliana |
AGI-code | AT1G13220.2 |
Description | nuclear matrix constituent protein-related |
TAIR curator summary | Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. |
Alias | [CRWN2][LINC2][CROWDED NUCLEI 2][LITTLE NUCLEI2] |
Gene coexpression |
MR |
MR | Locus | Description |
1 |
Ahg347316 | |
9.48683 |
Ahg477337 | ARM repeat superfamily protein |
18.1659 |
Ahg480564 | GCIP-interacting family protein |
24.2693 |
Ahg476030 | Prolyl oligopeptidase family protein |
29.2404 |
Ahg494453 | RING/U-box superfamily protein |
31.3847 |
Ahg917537 | Calcineurin-like metallo-phosphoesterase superfamily protein |
43.6119 |
Ahg331729 | |
48.4974 |
Ahg491547 | |
53.3854 |
Ahg930999 | Ribosomal protein S12/S23 family protein |
55.857 |
Ahg470979 | NPK1-related protein kinase 1 |
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RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
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Growth Chamber expression |
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