Detail



ID : Ahg472067

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472067|fgenesh2_kg.1__2021__AT1G18480.1
Sequence
ATCCCGGAAA ATGTCAAGCA GAGAAAACCC TAGCGGAATC TGCAACAACA TTCCCAATCT CATCTCTTCT TTCGTCGACA CTTTCGTTGA TTACTCCGTC TCCGGCATCT TCTTGCCTCA AGATCCTAGC CCACAGAATG ATATTCTGCA AACGAGGTTC CACAAACCGG AGCGACTCGT TGCAGTCGGC GATCTCCATG GCGATCTCGA CAAGTCTAGA GAAGCATTCA AGATCGCTGG ACTGATTGAT TCGTCGGACC GATGGACTGG TGGATCCACG ATGGTTGTTC AGGTGGGAGA CGTACTGGAT CGAGGAGGAG AGGAGTTAAA GATTCTTTAT TTCTTAGAGA AATTGAAACG AGAGGCTGAG AGAGCTGGAG GTAAGGTTCT GACTATGAAT GGCAACCATG AGATCATGAA TATAGAAGGT GACTTTCGAT ATGTGACCAA GAAGGGTTTA GAGGAATTTC AGGTTTGGGC TGATTGGTAT TGTCTAGGGA ACAAGATGAA GACTTTATGC AAAGGTCTTG ATAAACCTAA GGATCCTTAT GAAGGGATTC CGATGAGCTT CCCTCGTATG AGAGCCGACT GTTTTGACGG AATTAGAGCT AGGATTGCTG CATTGAGACC TGAAGGTCCG ATTGCAAAGA GATTCTTGAC TAAGAATCAA ACAGTTGCTG TTGTTGGTGA TTCTGTGTTT GTTCATGGGG GACTTTTAGC GGAGCACATA GAGTATGGAC TGGAGAGGAT AAACGAGGAG GTTAGGGGTT GGATTAACGG GTTGAAAGAA GGACGATATG CGCCTGTGTA TTGTAGAGGA GGAAACTCTG TAGTTTGGTT GAGGAAATTC TCGGAAGAGA TGGCTCACAA ATGTGATTGT GCAGCTCTTG AGCATGCTCT TTCCACTATT CCCGGGGTTA AGAGGATGAT CATGGGACAC ACAATCCAGG ATGCTGGTAT CAACGGTGTT TGTAATGATA AAGCCATTAG GATTGATGTG GGCATGTCCA AGGGATGTGC TGACGGACTG CCTGAGGTTT TGGAAATCCG CAGGGACTCG GGTGTGCGGA TATTGACATC GAATCCATTG TATAAGGAGA ATCCGTATTC TCATTTAGCT CCTGATAGTA AAACGGGTCT CGGGTTGCTG GTACCAGTTC CTAAGCAAGT GGAAGTCAAA GCTTGAAGAC CTTTTAGTAA ACA 
Length1203
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7390619.. 7391821
Download Sequence
A.thaliana
AGI-codeAT1G18480.1
DescriptionCalcineurin-like metallo-phosphoesterase superfamily protein
TAIR curator summary
Alias[AtSLP2][SLP2][Shewenella-like protein phosphatase 2]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
9.38083 Ahg496842 plant U-box 49
14.0712 Ahg951415 hydroxyproline-rich glycoprotein family protein
23.1733 Ahg479925 KRR1 family protein
43.6348 Ahg471744 Protein of unknown function (DUF1644)
48.3735 Ahg485198 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2
53.479 Ahg486254 RING/U-box superfamily protein
55.4527 Ahg495540 Protein kinase superfamily protein
63.0476 Ahg482617 Family of unknown function (DUF662)
63.4823 Ahg927086 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression