| Annotation |
|---|
| Description | jgi|Araly1|472142|fgenesh2_kg.1__2096__AT1G19180.2 |
| Sequence |
AACTCTGCAA CCAAACCAAA ACCAACCCAA AAAGCTTTAA AGAGACCCTC CATTTCTCCC TCGTGACAAA CGCAATTTGC AGAGAAGCAA CAACATCAAT AAGAATTTCA AAGTTTTATT TGTTAAAGAT GTCGAGTTCT ATGGAATGCT CTGAGTTCGT CGCTAGTCGG AGATTTACTG GGAAGCCGAG CTTCTCACAA ACGTGTAGTC GATTGAGTCA GTACCTGAAG GAGAACGGTA GCTTTGGAGA TCTGAGCTTA GGCATGGCAT GCAAGCCTGA TGTCAATGGT AAGAAACCTT CTCTTTGTCC TAGATCCAGC TTTTTTCGTT TTCTCTGATT TCGAATTCTT GAATCTTGAT CTTGCAAACA TTTCAAGAAA ATTGAAAAGA ATTGCGAATC GATTCAAAGA AAATTATGGG AGAGAGTTCT TACTTTTGGA TCATGTATTT GCAGGAACGT TTGGCAACTC ACGTCAGCCG ACAACAACGA TGAGTTTATT CCCTTGTGAA GCTTCAAACA TGGATTCCAT GGTAGCACCA GCTCAAGATG TTAAACCGAC GAATTTGTTT CCACGGCAAC TAAGTTTTTC TTCCTCATCT TCCTCTGTTC TAAAGGAAGA TGTTCTGAAA ATGACACAGA CTACCAGATC TGTGAAACCA GAGTCTCAAA CTGCACCATT GACTATATTC TACGCCGGGC AAGTGATTGT ATTCAATGAC TTCTCTGCTG AAAAAGTCAA AGAAGTGATG AACTTGGCTA GCAAAGGCAC CGCTAATAGC TTCACCGGTT TCACATCTAA TGTCAACTTA GCCAAGAATC AAACCGAGAT CAGAAGCAAC ATCGCTACTA TCACAAACCA AGTTCCTCAT CCAAGAAAAA CCACAACACA AGAGCCAATC CAATCCTCCC CAACACCATT GACAGAACTT CCTATTGCTA GAAGAGCTTC ACTTCACCGG TTCTTGGAGA AGAGAAAGGA CAGGGTTACG TCAAAGGCAC CATACCAGTT ATGCGATCCA GCCAAAGCGT CTTCAAAGCC TCAAACCGCA GACAACATGT CGTGGCTCGG TTTGGCAGCT GAAATATGA |
| Length | 1089 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7713127.. 7714290 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G19180.1 |
| Description | jasmonate-zim-domain protein 1 |
| TAIR curator summary | JAZ1 is a nuclear-localized protein involved in jasmonate signaling. JAZ1 transcript levels rise in response to a jasmonate stimulus. JAZ1 can interact with the COI1 F-box subunit of an SCF E3 ubiquitin ligase in a yeast-two-hybrid assay only in the presence of jasmonate-isoleucine (JA-ILE) or coronatine. Application of jasmonate methyl ester to Arabidopsis roots reduces the levels of a JAZ1:GUS fusion protein, presumably by stimulating ubiquitin-proteasome-mediated degradation. The Jas domain appears to be important for JAZ1-COI1 interactions in the presence of coronatine. Two positive residues (R205 and R206) in the Jas domain shown to be important for coronatine -dependent COI1 binding are not required for binding AtMYC2. |
| Alias | [AtJAZ1][JAZ1][TIFY10A][jasmonate-zim-domain protein 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg951491 | myb domain protein r1 |
| 4.24264 |
Ahg476385 | PLAT/LH2 domain-containing lipoxygenase family protein |
| 5 |
Ahg472978 | salt tolerance zinc finger |
| 5 |
Ahg312706 | jasmonate-zim-domain protein 5 |
| 5.83095 |
Ahg940069 | NDR1/HIN1-like 3 |
| 6 |
Ahg488138 | jasmonate-zim-domain protein 10 |
| 10 |
Ahg928294 | Plant neutral invertase family protein |
| 10.9087 |
Ahg476633 | TIFY domain/Divergent CCT motif family protein |
| 10.9545 |
Ahg950444 | Xyloglucan endotransglucosylase/hydrolase family protein |
| 15.2315 |
Ahg482961 | alpha/beta-Hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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