Detail



ID : Ahg475737

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|475737|fgenesh2_kg.2__867__AT1G66340.1
Sequence
GTTAAACCCA ACCATTTTTG ATTTTGAAAA AAAGCTTCAA CGCTCCTTTT TCTCCTCCGT CGCTCTCCGC CGCGTCCAAA ATCCCCAAAT CCTCCCTCTT ATCCGATCAA TTCTTCCCAA GTTTGTTTGT TTAACAGGTG TGTGTGTGTG TGTGTGTAAT TCATAATGGA AGTCTGCAAT TGTATTGAAC CGCAATGGCC AGCGGATGAA TTGTTAATGA AGTATCAATA CATATCGGAT TTCTTCATTG CGATTGCGTA TTTTTCTATT CCTCTTGAGT TGATATACTT TGTGAAGAAA TCTGCGGTGT TTCCTTATAG ATGGGTGCTT GTTCAGTTTG GTGCTTTTAT TGTTCTTTGT GGGGCGACTC ATCTTATTAA CTTATGGACT TTCACTACGC ATTCGAGAAC CGTTGCGCTT GTTATGACTA CTGCGAAAGT GTTAACTGCT GTTGTCTCGT GTGCTACTGC GTTGATGCTT GTTCATATTA TTCCTGATTT GTTGAGTGTT AAGACCCGGG AACTGTTCTT GAAAAATAAG GCTGCGGAGC TTGATAGGGA AATGGGATTG ATTCGAACTC AGGAAGAAAC CGGACGGCAT GTTAGAATGT TGACACATGA GATTAGAAGC ACTTTAGATA GACATACTAT TTTAAAGACT ACACTTGTTG AGCTTGGTAG GACATTAGCT TTGGAAGAGT GTGCATTGTG GATGCCTACT AGGACTGGGT TAGAGCTACA GCTCTCTTAT ACACTTCGTC ACCAACATCC CGTGGAGTAT ACGGTTCCCA TTCAATTACC GGTGATTAAC CAAGTATTTG GTACTAGTAG GGCTGTAAAA ATATCTCCTA ATTCCCCTGT GGCTAGGTTG AGACCTGTTT CTGGGAAATA TATGCTTGGG GAGGTGGTCG CTGTGAGGGT TCCGCTTCTC CACCTTTCTA ATTTTCAGAT TAATGACTGG CCTGAGCTTT CAACGAAGAG ATATGCTCTG ATGGTCTTGA TGCTTCCTTC AGATAGTGCG AGGCAATGGC ATGTCCATGA GTTGGAACTC GTTGAAGTCG TTGCTGATCA GGTGGCTGTG GCTCTCTCAC ATGCTGCGAT CCTAGAAGAG TCTATGCGAG CTAGGGACCT TCTCATGGAG CAGAATGTCG CTCTGGATCT AGCAAGACGA GAAGCAGAGA CAGCAATCCG TGCCCGCAAT GATTTCCTGG CAGTTATGAA CCATGAGATG CGTACTCCGA TGCATGCAAT CATTGCACTC TCTTCCTTAC TCCAAGAAAC GGAACTAACC CCTGAACAAA GGCTGATGGT GGAAACAATA CTTAAAAGTA GCAACCTTTT GGCAACTTTG ATGAATGATG TCTTAGATCT TTCAAGGTTA GAGGATGGAA GTCTTCAACT TGAACTTGGA ACGTTCAACC TTCATACATT ATTTAGAGAG GTCCTGAATC TGATAAAGCC TATAGCGGTT GTTAAGAAAT TACCCATCAC ACTAAATCTT GCACCAGATT TGCCAGAATT TGTCGTTGGG GATGAGAAAC GACTAATGCA GATAATTTTG AATATAGTTG GTAATGCTGT GAAATTCTCC AAACAAGGTA GTATCTCCGT AACCGCTCTT GTCACCAAGT CAGACACTCG AGATGCTGAC TTTTTTGTCG TGCCAACTGG GAGTCATTTC TACTTGAGAG TTAAGGTAAA AGACTCTGGA GCAGGAATAA ATCCTCAAGA CATTCCAAAG CTTTTCACTA AATTTGCTCA AACACAATCT TTAGCGACGA GAAGCTCGGG TGGTAGTGGG CTTGGCCTCG CCATCTCCAA GAGGTTTGTG AATCTAATGG AGGGCAACAT TTGGATTGAG AGCGATGGTC TTGGAAAAGG ATGCACAGCT ATCTTTGATG TTAAACTTGG GATTTCAGAG CGTTCAAACG AATCTAAACA GTCGGGCATA CCGAAAGTTC CAGCCATTCC CCGACATTCA AGTTTCACTG GACTTAAAGT TCTTGTCATG GACGAGAATG GGGTAAGTAG AATGGTGACA AAGGGACTTC TTGTACACCT TGGATGCGAA GTTACCACTG TGAGTTCAAA CGAGGAATGT CTCGGAGTTG TATCCCATGA GCACAAAGTA GTCTTCATGG ACGTGTGCTT GCCCGGGGTC GAAAACTACC AAATCGCCCT CCGTATACAC GAGAAATTCA CAAAACAACG CCACCAACGG CCACTACTCG TGGCACTCAC TGGTAACACA GACAAATCCA CAAAAGAGAA ATGCATGAGC TTCGGTCTAG ACGGCGTGTT GCTCAAGCCC GTATCACTAG ACAACATGAG AGACGTTCTG TCTGATCTTC TTGAACGCCG GGTTCTATAC GAGGGCATGT AAAGGC 
Length2386
Protein Sequence
Protein Residue
Map Locationscaffold_2: 10302830.. 10306078
Download Sequence
A.thaliana
AGI-codeAT1G66340.1
DescriptionSignal transduction histidine kinase, hybrid-type, ethylene sensor
TAIR curator summarySimilar to prokaryote sensory transduction proteins. Contains a histidine kinase and a response regulator domain. Homodimer. Membrane component. Binds ethylene. Mutations affect ethylene binding and metabolism of other plant hormones such as auxin, cytokinins, ABA and gibberellic acid. Ethylene receptor. Has histidine kinase activity. Is regulated by RTE1.
Alias[AtETR1][EIN1][ETR][ETR1][ETHYLENE INSENSITIVE 1][ETHYLENE RESPONSE][ETHYLENE RESPONSE 1]
Gene coexpression
MR
MR Locus Description
10.9545 Ahg929940 ARM repeat superfamily protein
12.49 Ahg924045 calpain-type cysteine protease family
19.975 Ahg927966 Tetratricopeptide repeat (TPR)-like superfamily protein
21.4476 Ahg488087 DNA binding;zinc ion binding;DNA binding
24.0832 Ahg491448 Sec23/Sec24 protein transport family protein
26.3629 Ahg471132 NF-X-like 1
27 Ahg488990 Phosphoinositide phosphatase family protein
31.4643 Ahg487300 Single-stranded nucleic acid binding R3H protein
33.9117 Ahg496189 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
37.4166 Ahg471420 ATP binding;nucleic acid binding;helicases
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression