Detail



ID : Ahg476315

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476315|fgenesh2_kg.2__1445__AT1G71890.1
Sequence
TTTTCTTTTT GTCTGTTCGT GTTTTTTCAT AATGGGAGCC TTGGAAGCAG AAAGAGCCGC CAACGATGCG GCGGCGTTAG AGACACAGTC TTCATCGGAA GATCTCGGTC AACCATCTCC GCTGCGTAAA ATCATCTCCG TGGCTTCAAT CGCCGCCGGT GTACAGTTTG GGTGGGCCTT ACAGCTCTCT CTTCTGACTC CTTACGTACA ACTTCTCGGA ATCCCTCACA AATGGTCGTC TTACATGTGG CTCTGTGGTC CTATCTCCGG CATGCTTGTT CAACCAATCG TCGGTTACCA CAGTGACCGA TGCGAGTCCA GATTCGGTCG CCGTCGTCCT TTCATCGCCA CCGGAGCCGT ACTCGTAGCC GTCTCGGTTT TCCTTATCGG ATTCGCGGCG GATATGGGAC ATAGTTTTGG AGATAAACTC GAGAACAAGG TAAGGACTCG AGCCATTATA ATCTTCCTTA CCGGGTTTTG GGTCCTTGAC GTGGCTAACA ACACCTTACA AGGACCATGC CGTGCTTTCT TAGCCGATTT AGCCGCCGGA GACGCTAAAA AAACGCGAGT CGCAAACGCA TGTTTCTCTT TTTTTATGGC GGTTGGAAAC GTTTTGGGTT ACGCTGCTGG ATCTTACACT AACCTTCACA AAATGTTTCC TTTCACAATG ACAAAAGCTT GCGATGTCTA TTGCGCGAAT CTCAAGACTT GTTTCTTCCT ATCCATCACT CTCCTCCTTA TCCTCACCTT CTCGTCTCTA TGGTACGTTA AAGACAAACA ATGGTCTCCG CCACATGGAG AGAAAGAGAA AACATCAAGT GTTTTTTTCT TTGGAGAAAT CTTTGGAGCT GTCAGAGTCA TGAAACGTCC CATGTGGATG CTTCTAATGG TCACGGTTAT TAATTGGATC GCTTGGTTTC CGTTTCTTTT GTACGATACC GATTGGATGG GTCGTGAAGT GTACGGTGGA AATTCAGATG GAAATGAGCA AGCCAAGAAA CTTTACGACC AAGGAGTTCA GGCTGGTGCA TTGGGATTGA TGTTTAATTC AATACTTCTT GGTTTCGTGT CACTTGGTGT TGAATCGATT GGTCGGAAAA TGGGAGGAGC TAAACGACTT TGGGGATGTG TGAATTTCAT ACTCGCCATA GGTTTGGCCA TGACGGTTCT TGTTACGCAA TCCGCTGATA ACCACCGGAA AACCGCCGGT GCTTTGTCCG GACCGAGCAG TGGTATTAAA GCCGGAGTAT TTAGTCTCTT TACCGTTCTT GGTATCCCAT TGGCCATTAC TTACAGTGTT CCATTTGCAC TAGCGTCCAT TTTCTCAACC AATTCCGGTG CCGGCCAAGG ACTTTCTCTA GGCGTTTTAA ATATAGCGAT TTGTATACCA CAAATGATAG TATCATTCTC AAGTGGACCA TTGGACGCTC ACTTCGGCGG TGGAAACCTA CCTTCATTTG TGGTCGGAGC TATTGCGGCT GCGATTAGTG GAGTGTTAGC GTTAACCGTT CTACCTTCAC CGCCTGCGGA CGCACCAGCC ATGTCAGGGG CTATGGGATT CCATTAGTTT ACTAGTCTTT AAAGTGAGAA TTTAATAAAC TTTGGGTCGT CTGTTTTTTT TTACTTTTGT TATT 
Length1634
Protein Sequence
Protein Residue
Map Locationscaffold_106: 1980.. 4235
Download Sequence
A.thaliana
AGI-codeAT1G71890.1
DescriptionMajor facilitator superfamily protein
TAIR curator summaryEncodes a sucrose transporter that is expressed in the endosperm. Mutants have delayed accumulation of fatty acids and embryo maturation.
Alias[ATSUC5][SUC5][SUCROSE-PROTON SYMPORTER 5]
Gene coexpression
MR
MR Locus Description
1 Ahg497263 Major facilitator superfamily protein
25.5343 Ahg491237 Cupredoxin superfamily protein
43.5431 Ahg890578 HSP20-like chaperone
50.3984 Ahg936672 Protein of unknown function (DUF1216)
53.0566 Ahg481945 LOB domain-containing protein 13
53.5164 Ahg950744
55.2721 Ahg901971 Integrase-type DNA-binding superfamily protein
56.1249 Ahg311624 F-box/RNI-like superfamily protein
62.3859 Ahg917668 translocon at the outer envelope membrane of chloroplasts 75-III
64.8999 Ahg354612 gibberellin 3-oxidase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression