Detail



ID : Ahg478183

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478183|fgenesh2_kg.3__884__AT3G08800.1
Sequence
ATGACTTCAT CAATGGAGGA AGACGACTCG ATCTCTGCTG AATCAATCTC TCTCGACACT CTAGCTTCTA TTAGATCACT CATTATCAAC GCCGACACTT CCGTCTCGGT GATTTCCTCA GTTTTCGATT TCCTTACTGG TCTTCTGAGT CGAGGGGACT CGGCGATTCT TCACCATGTC CTCAAGCTAC TCTCCGACCT AGCTTTCCGG CGAAAGGAAT TAGCAAAACA AATCTTCGAC TCAATCCTGT CCAACTTACT CCGCCTTCAA AACGGCACCG CCGAGGTGAG CCACGGACGC GCCGCCGTGG AATCGCTTGC TGTGCTTGCG TCATTATCCG AAACAAATCC TAGCATCGCC GCCGCGCTTT CCAAAATCGA CGGCGAGGTA TTTGCGTCGA TTTGCCTCGG AGCACCTATA TCTTCTCGGC TGTGGCTACT TAGGAACGCG GAGAGGTTCA ATGTTCCGTC GTCCGTACTT TTCACCTTGT TTTTAGGGTT TACTAAGGAT CCGTATCCAT TTATCAGAAA AATAGCTCTG GATGGATTGA TTAATATATG TAACGCTGGT GACTTTAATC ACGCTCACGC CGTAGAAGGT TGCTATACTC GTGCTGTTGA GCTTCTAAGC GATGCTGAAG ATAGCGTCAG ATCTTCTGCA GTTCGTGCCG TCAGTGTGTG GGGCAAAGTC ATGATATCAT CCAAGGAAGA AGAGCTGAGC AGAAGAAAGT GTACAGATGC TGCTTTTCTC CAGCTTTGTT CTGTTGTGAG AGATATGAGT GTAGACGTGA GGGTTGAGGT CTTCAAGGCA TTTGGGATAA TAGGAACTGC ATCAGAAAGC ATTATACTGC AAACACTTTC TAAAAAAGTA TTGGGAGCCG GAAAAGGGAA GAAACCGCAG AATCATCTTT CTAATGGATC AGCTGATGTC AGTGCTGCAG CTGGAGTTTT CATCCATGGT TTTGAAGATG AATTCTACGA GGCACGGGAA GCTGCGGTTA ACTCCTTCCA CTCCCTCTCA GTAAATTCTA TCAAATTCCC AGATGAAGCT GTGTATCTAT TGATGGATAT GCTGTACGAT GATTATATGG TTGTCAGGTT GAAAGCTTTA GAGGCATTGC ATCATATAGC AGACTTGGGG AACCTGAAGA TACAGGAAAC TTATATGCCC GCCTTTTTGG ATGCTATTGT TGATACTTCT GAAAACATTA GAGTTGAGGC TAGAAACATT CTTAAATTGG CAAAGCTGCC TGATCTGAAG CTGGTCAACA ATTGTGTTGA TGGTGTCCTA AAAAGTTTAG AGATGTATCC ACAGGACGAA CCTGATATCT TATCTGCTCT GTTCCATTTC GGACAAAAAC ACCCAAATTT CTTAGTCAGT ATGGTCAAGA GATTTAGTGA AAAGTTAGGG ACAGCTTCCG GAAATAAACT GGAATTCAAT AGCCGACAGT TATCTGCTTC TCTGATGCTG ATAATCTCAG CCCCTCTCTC AAACAAACAA AGCATCACTT CGATACCACC TCTGGCATTT TCATATTCAC TTGCAATGCT GGGGAAATTC TCTAGTGGAC TTCATGATAT GATGGACCAG TATATGCTTC TGGCTTACTT GACTCATTGC GCTATTCTTT CGTCTTCTTC GGGGACAGAA TTCAACAAAG GAGATATATT TTTTCAGGCA TATAGGGACA GTAATGCAGA TCTTTCCGGA AACCCCGTCC TATTACCCAG CAAAGATATA CCTTCTGAGA GCAAATACAT GGCTTCCAAA GCAGAACTGG AAATTGGAAA TCAAGCACTT AAGTTTCTTA ACCATATACT GTTGAAAATA AAGGCTGCCT GGTTGTTATC ACAATCAGGG TGCTCGAAAG AAGCACTCCG AGCATTGAGG GCTTGCAAAC AGGAGTTAGC AACTTTGACA GCCGATTCTT CAATCTCCAA CGGTACATTA GAATTTATCT GTCAGTATGT TCACGTAATA GAACTTCTCG CTCAAGTATG GCCTCATTTT GAATACGCAA GACACATCAG CACGTGTAGA TCTGTAGAAC TGGAACTACT GATGAAAGAG GTAGAGATAA AACTGATGGA GATAAGGTGT AGATTCACAG GCCTGTCTAC GGAGGAGTCA TTAGTAATAG AGTTAGTAAT TTTTGGTTGC TTGTTAAGGC TATATAAATT TGAGATTTGC TGCCGCCTTA GCTGCACGGA GAAGCTATCT TCAACAATAT CTCAATTAGA GCTCCACCAT GAACAACAAT GCACCAAACC ATCAGAATTT TTAACCGAAA CTAAGAAGTC ATTGAAAGAG ATTGGGAGCT CTGATGATAT AAATAGCTGT AGACTGCTTC ATCTCATCAA GATATTCAAT TGCTTCTCTC CGGAACAGTT TACGCTTTCT GGTAATCTGC AGTGTGTCAG CGCAGAGCTA GAGATTCCTG GTAATGGTCC TTACAGTCCG ATTTCCTTTG TGCCTGGTCT TCCGGTGGCT ATACCGTGTG AGATCATGCT GCTTAATGTG CCAAGAGATA CCTGTTTGTG GCTGAGAATA TCTAGAAGCG ATGAAACTTG CCAGTTTGTG TACTTGGATC CAAACCTCTA CAATGGAGAT GGGAGAGAGA AGAGGTTCAT GTTTACTGCA GTAACGTACA TGACCCCGAG GGCTGTTGTG TTCACATTGC GGGTCTCAAT AGGCATAGAG TGTCTGTTTG AAGACATTAG TTACAGAAAA CAGCGTCATG GTCCCAAGCA TCCAGTGGCC TATCTGTGTA AGGAAAGAGA AGTTCACCTT TCTCTTGTTT CAAGAACCTA ATGTGAGATA TTCTTCACAT TAATGAGTCT GCAGAGAAAA CTCGTCATGG CTTTAAAAGA GCTGCTAATT GTGGCTAAAG GACTAAGAGG GTTGACATGG GATGCTGCCG AACATAGATT TTGGAAGAAG ATTTTGAGTG TTACTACCTT TGTAGCTTAC TCATTGAGAC AAAATTTTGC AAAACTGCAT CAAAAGGCCA ATGCTAGTAA CCAA 
Length3024
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3261889.. 3265947
Download Sequence
A.thaliana
AGI-codeAT3G08800.1
DescriptionARM repeat superfamily protein
TAIR curator summary
Alias[SIEL][SHORT-ROOT interacting embryonic lethal]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg324413
11.3137 Ahg314259 novel plant snare 12
14.4568 Ahg495713
14.4914 Ahg929447 ENTH/VHS family protein
18 Ahg323774
27.2029 Ahg475141
33.2866 Ahg913933
36.8511 Ahg934926 RNA-binding (RRM/RBD/RNP motifs) family protein
47.244 Ahg473847 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
69.9786 Ahg938469 ubiquitin-conjugating enzyme 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression