Detail



ID : Ahg478311

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478311|fgenesh2_kg.3__1012__AT3G09880.1
Sequence
CTCTCTTTCT CGCTCTCTTC CTGATTCGAT CGCCGGAAAA TCTTAGCCGT CCGATCAACC ACCGCATACT CCGAGAAGAT CTCTTCGATT AGTTCAATGC TCTGATTTTC ATCACCTCAG ATCTCCGACA ACATTCCGGT ATCTCGCTCT TTTTCTCCAA ATCCTTATCC TCGGGATTAC GAAAATGAGG AGCTTGATCC GAGAGAGGCA TAGTGGAAGC TATCTGTGAA ATCTTAGGAT TCGAATCTGA ATTCTCAGGC TTTTTGAGAT GCTGATTCAA TTTTGAGCTC CTCTGTTAGT GTAAATCTCC TCAGCTCAGA AACTTAGGGT TTAGTTTGGG GTCCTTTGCT CTTAGTTGCG TAAGCTATGT TTAAGAAAAT CATGAAAGGT GGGCATCGAA AGCCCTCTAA ATCCGAAGCT AATGAACCTT CTAGTTATGG GATTGGTCTG CCTGATAATA GGTCAGGTCC TGGCTCCAAT GTGGTCGTTA GTCACGCTTC TCGTGGTGCA TTGGTTAACT CGTCTCCGTC GCCAGTGGCT GCAACTCCAC CACCTCCGCC TATGGGCTCC GTGGAGGTAC TCCCGTTGTT TAGAGATGTT CCGGTTTCAG AGAGGCAAAC TTTGTTCTTG AGGAAACTTC AAAATTGCTG TTTCCTATTC GATTTCACTG ACACGATTAA GAACGCGAGA GAGAAGGAGA TTAAGAGGCA AACGTTGCTG GAGCTGGTGG ATTTTATACA GTCTGGATCT AGTAAGGTCT CGGAATCGTG TCAGGAAGAA ATGATTAAGA TGATTTCTGT TAATATATTC CGGTCTCTCC CTCCAGCATC ACACGAGAAT ACGGGTCAAG AGCCTGCAGA TCCTGAGGAA GAGGAACCCT ATTTAGAACC TTCTTGGCCT CATTTACAGC TAGTTTACGA GTTGCTACTG AGATATGTTG TTTCGACCGA CACGGATACA AAGGTGGCCA AACGGTATAT CGACCATTCT TTTGTGTTAA AGTTGCTTGA TTTGTTTGAT TCTGAGGATC CGAGAGAGAG GGAGTATTTG AAAACGATTC TTCATAGGAT TTATGGGAAG TTTATGGTCC ACAGACCCTT TATTAGGAAG GCAATCAACA ACATATTCTA TAGGTTTATT TATGAGACAG AGAGACACAG TGGGATTGGG GAACTCTTGG AGATTCTAGG CAGTATCATA AACGGGTTTG CGTTGCCTAT GAAGGAGGAG CACAAGCTAT TCCTAATCAG GGTGTTGATA CCATTGCATA AGCCAAAACC AATCGTTGTA TATCATCAGC AGTTATCTTA TTGCATCGTT CAGTTTGTGG AAAAAGATTA TAAGCTTGCG GATACAGTAA TCAGGGGGTT GTTAAAGTAT TGGCCCGTGA CAAACTGCGC AAAGGAAAAT CTCTTCCTTG GAGAACTTGA AGAAGTTCTT GAGGCAACAC AGCCTGTCGA GTTCCAGCGT TGCATGGTTC CATTATTCCA ACAGATTGGT CGCTGCCTCA CTAGCTCTCA CTTTCAGGTT GCAGAACGAG CACTGTTCTT GTGGAACAAC GAGCACATTG TGGGTCTAAT CGCACAGAAC CGAAGTGTGA TCCTTCCAAT CATATACCCT GCATTGGAAA AGAACATACA GTCTCACTGG AACCAAGCAG TCCATGGTCT AACCACAAAT ATCAAGAAAA TGTTCATGGA AATGGATCCT GAGCTCTTTG AAGAATGCCA AAGACAGTAT GAAGAGAAAC AATTGAAATC CAAAGAAGTA GAAGAACAAC GGCAATATAC ATGGAAGAGA TTAGCAGAAG CAGCAGCGGA ACGAGACGGA GGAGGAGAAG GAGAAGAAGA TCATATGATC ACTTCCTAGA TCGATCAAAG AGGGTATTAT TCTTTCACTT TTTTTTTTGT TTTAATTTTC TCTTGGAACT TGGATTTGTT TGTTGTTTTG AAAATCATGG GTTCAAAATC TGATTGCTCA GAGAAGTAGA GAGAGAGAGA GAAGTGAGCT ATTACTATCA GAGAATATGT CTGTAGCAGT AAGAAATGTG TTTGTGATCT TCTGTCTAAT TTTGTTCGTG GACGGCACTT TAAAATTTTG TAAAATGTTT AATTATATAT ACTGTGGATG TTATTAGCCA TCTCAAAATC C 
Length2151
Protein Sequence
Protein Residue
Map Locationscaffold_6: 964768.. 965712
Download Sequence
A.thaliana
AGI-codeAT3G09880.1
DescriptionProtein phosphatase 2A regulatory B subunit family protein
TAIR curator summaryEncodes B' regulatory subunit of PP2A (AtB'beta).
Alias[ATB' BETA]
Gene coexpression
MR
MR Locus Description
8.66025 Ahg483953 RING/U-box superfamily protein
11.4018 Ahg921783 no pollen germination related 1
12.49 Ahg479220 novel plant snare 13
12.49 Ahg311923 F-box family protein
12.9615 Ahg491155 RAC-like 3
17.4929 Ahg888770 F-box family protein
18.2483 Ahg947562 RING/U-box superfamily protein
21.2368 Ahg491315 dynamin-related protein 3A
22.1585 Ahg492815 small nuclear ribonucleoprotein associated protein B
25.0998 Ahg908195
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression