Detail



ID : Ahg480008

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480008|fgenesh2_kg.3__2709__AT3G24900.1
Sequence
ATGTCTGAAC CGCTTTTGCG TTTGAATTTT CTCTCGCTAC TCTTACTCTC TTGTGTCTCC TTGCCTTCAA GCTCCTTCAC TTTTAATAAC CCTGTAGTTG GCCAAGGTGC TTGTGGTCTC CATCAGATTC AAGCCTTTAC ACAGTTCAAG AACGAGTTTG ATACTCGTGC TTGCAACCAT AGTGACTCCT TGAATGGGGT GTGGTGCGAT AACTCCACGG GCGCGATCAC GAAGCTACGA CTCAGGGCCT GTCTCAGTGG AACTCTGAAA TCTAACAGTA GCCTCTTCCA GTTTCATCAG CTCCGTTACC TTTATCTCTC TTATAACAAC TTCACCCCCT CTTCAATCCC TTCCAAGTTT GGAATGCTCA ACAAATTAGA GGTTTTATTT ATTTCCAGTG GTGGCTTCCT CGGCCAAGTT CCTTCCTCAT TTAGTAACCT AAGCATGCTT TCCGCTTTAC TCCTTCACAA TAACGAGCTC ACTGGTAGTT TATCATTTGT GCGGAATCTA CGCAAGCTCA CAGTTTTAGG TGTTTCTCAT AATCACTTCT CTGGAACTCT AGATCCCAAC AGTAGCCTGT TTGAGTTGCA CCACCTCACT TTCCTTGATC TCAGTTTCAA CAACTTCACC TCCTCTTCAC TCCCTTATGA ATTTGGCAAT CTCAACAAAC TAGAGGCCTT GTTTCTTAGC TCTAATAGCT TCTATGGTCA AGTTCCTCCC ACAATTAGTA ACCTAACCCA GTTAACCGAG TTGAAGCTTC TCTCGAACGA CTTCACAGGT AGTTTCCCAC TTGTACAAAA TCTAACCAAG CTCTCCATTC TAGAACTTTC TGATAATCAC TTCTCTGGAA CCATCCCTTC TTCTTTCTTC ACTATGCCTT TCTTATCCGA TCTTGGTTTA AATGGAAACA ATCTCAACGG TTCATTTGAA GCTCCTAACT CCTCCTCCTC ATCAAGGCTA GAGCATTTGT ACCTAGGTAA AAACCAATTT GAAGGAAACA TCTTAGAGCC TATCTCAAAG CTCATCAACC TCAAAGAGCT CGAACTTTCT TACCTAAACA CAAGCTACCC AATTGACTTA AGTCTCTTCT CCTCTCTGAA ATCTTTGTTG CTCCTCGATC TTTCCGGTGA TTGGATATCT CAGGCTAGTT TAAGTTCGGA TTCATACATC CCATCGACCT TGGAAGCGTT GGTTTTGAGA GACTGCAACA TCAGTGATTT CCCAAACATC TTAAAGACCC TTCAGAATTT GGAGTTTATT GCCTTATCAA ACAATAGAAT CAGTGGGAAA ATTCCAGAGT GGTTATGGAG CCTTCCTCGT CTAAGCTCAG TGTTCATTGG AGATAATTTG TTAACTGGCT TCGAAGGTTC ATCAGAAGTA TTAGTAAATT CATCGGTGCA GATCTTAAAT TTGGATTCAA ATAGTTTAGA AGGAGCACTT CCGCATCTAC CGCTCTCTAT CAGCTACTTC TCTGCAAAAA ACAATAGTTT CACAAGCGAC ATACCTCTTT CAATCTGCTA CAGAAGCTCG CTTGATATCC TTGATCTAAG CTACAACAAC TTCACCGGTC TAATTTCTCC ATGTCTGAGT AACTTCTTGA TTTTGAATCT CCGGAAGAAC AACTTGGTAG GAAGTATTCC AGACAAGTAT TATGCTGATG CACCTCTACG GACACTTGAT GTTGGCTACA ATCGATTAAC AGGGAAGCTT CCAAGGTCTC TGCTAAACTG CTCAGCTCTA CAGTTTATAA GTGTGGACCA CAACGGAATC AAAGATACAT TCCCTTTCTT CCTCAAGGCT TTACTAAAAT TGCAAGTCCT TATCCTCAGT TCAAACAAAT TCTATGGTCC ATTATCTCCT CCTAATGAAG GTCCTCTGGG ATTTCCTGAG CTGCGAATAC TTGAGATAGC TGGTAATAAA TTCACTGGAA GCTTGCACCC AAATTTTTTT GTGAATTGGA AAGCATCATC ACGCACGATG AATGAAGATC TGGGTCTATA TATGGTATAT GACAAGGTTG TTTACGGGAT CTATTACCTA TCCTATCTGG AAGCTATAGA TTTACAATAT AAAGGTCTAT CTATGAAGCA AGAGAGGGTT CTTACTTCCT CAGCCACCAT TAATTTTTCT GGAAATAGAC TTGAAGGAGA AATTCCTGAA TCTATCGGTC TCTTAAAGGC ACTGATCGCA CTCAACTTAT CGAACAACGC CTTCACAGGC CATATTCCTC TATCGTTGGC CAATCTTGTG AAGCTCGAGT CACTAGACCT ATCAAGTAAC AAACTCTTAG GGACTATTCC CAGTGGCCTA GGGACTCTCT CGTTTTTGGC GTACATGAAC GTGTCTCACA ACCAACTCAA TGGTGAAATA CCACAAGGAA CACAAATAAC TGGGCAACCT AAATCGTCCT TTGAAGGAAA TGCAGGGCTT TGTGGTTTTC CTCTTGAAGA AAGTTGCTTT GGGACTAACG CGCCACCAGC ACAGCAGACT AAAGAAGAAG AAGATGAAGA AGAGGAACAA GTGTTGAATT GGAAAGGCGT GGCAATAGGG TATGGGGTTG GAGTGTTACT TGGATTGGCA ATAGCACAAC TCATTGCTTC ATACAAACCG GAGTGGCTAG TTTGTCTGTT TAAGAGCAGA AACC 
Length2644
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11553219.. 11555859
Download Sequence
A.thaliana
AGI-codeAT3G24900.1
Descriptionreceptor like protein 39
TAIR curator summary
Alias[AtRLP39][RLP39][receptor like protein 39]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg480073 receptor like protein 41
16.2788 Ahg943489 Concanavalin A-like lectin protein kinase family protein
17.2627 Ahg482113 Leucine-rich repeat protein kinase family protein
26.3629 Ahg480590 NAC domain containing protein 36
27.7128 Ahg482052 autophagy 9 (APG9)
30.2985 Ahg346169 chitinase, putative
30.4631 Ahg951166 cyclin-dependent kinase E;1
33.4963 Ahg471132 NF-X-like 1
34.176 Ahg482304 Protein kinase superfamily protein
35.6651 Ahg938122 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression