Detail



ID : Ahg482113

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|482113|fgenesh2_kg.4__1173__AT2G31880.1
Sequence
ACAAGAAGAA AGTTTCTCTA ATTAAAATGG CTGTTCCCAC GGGAAACGCC CATCTCTTCT TTCTCCCGCC TCTCATCCTC GCCGTTCTCT CCTTTCTTCT TCTCTCTTCA TTCGTCTCTT CCGTTGAGTG GCTCGATCTC GATTCATCAG ATCTCAAAGC TCTTCAGATC ATCGAAACAG AGCTCGGAGT CAACAGTCAA CGTTCTTCCT CCAGTGATGT CAACCCTTGC GGTCGCCGAG GAGTTTTCTG CGAGAGACGG CGCTCTGCCA CCACCGGAGA ATACGTTCTC CGTGTCACGA GGCTCGTTTA CCGATCCAGG AGCTTGACGG GAACTATCTC TCCGGTGATT GGAATGTTGT CGGAGCTCAA GGAACTTACT TTGTCTAATA ACCAGCTGGT CAACGCTGTT CCGGTGGATA TCTTGAGCTG TAAGCAACTT GAAGTTCTTG ATCTTCGGAA AAATAGATTT TCAGGTCAAA TTCCAGGAAA CTTTTCTAGT TTGAGCCGTC TGCGAATCCT TGATCTTTCT TCGAACAAAT TCTCCGGGAA CTTGAATTTC TTGAAGAATC TACGAAACCT GGAGAATCTC TCTGTTGCAA ACAATCTCTT CTCAGGCAAA ATCCCGGAAC CAAGTGCATC GTTCCACAAT CTCCGGTTCT TTGATTTCTC CGGAAACCGG TATTTGGAAG GTCCGGTTCC GGTTATGAGC AATAACAAGC TTCAGACATC TCCACACCAA ACAAGACACA TTCTTGCTGA AACTCCATCT TCAAATTCCA CGAAGAAACC TAACAACAGC ACTACATCAA AAGCTCCAAA GGGAGCTCCA AAACCAGAGA AGTTGAAGAA GAAGAAGAAG AGCAAGAAGA AGAAAGTAGC GGCATGGATC TTAGGGTTTG TCGTTGGAGC CATAGGCGGA ACAATCTCTG GGTTTGTCTT CTCGGTGATG TTCAAATTGA TTATTCAAGC AATAAGAGGA TCAGGAAAAC CATCAGGTCC TTCCATATTC AGCCCATTGA TCAAGAAAGC TGAAGATTTA GCTTTCTTGG AGAATGAAGA AGCGTTAGCT TCTCTGGAGA TCATAGGAAG AGGAGGTTGT GGAGAAGTCT TCAAAGCTGA ACTACCAGGA AGCAACGGCA AGATCATCGC AGTAAAGAAA GTGATCCAAC CGCCTAAAGA CGCCGACGAA CTAACAGATG AAGATTCCAA GTTTATGAAC AAGAAAATGA GACAAATCAG ATCCGAGATC AGCACAGTCG GCCAAATCCG GCACCGGAAT CTTCTCCCAT TGTTAGCACA TGTGTCAAGA CCCGAGTGCC ACTACCTCGT TTACGAGTAC ATGGAGAAGG GGAGTTTGCA AGATATATTG ACTGATGTAC AAGCTGGAAA CCAAGAGCTA ATGTGGCCAG CGAGGCACAA GATTGCTTTA GGTATAGCCG CAGGGCTTGA GTACCTTCAC ATGGATCATA ACCCACGAAT CATTCACAGA GACTTAAAGC CAGCCAATGT TCTTCTTGAT GATGACATGG AAGCCAGAAT TTCAGATTTC GGACTGGCAA AGGTAATGCC AGATGCGGTC ACACATATTA CAACCTCGAA TGTTGCAGGT ACTGTGGGAT ACATAGCACC AGAGTTTTAT CAAACTCACA AGTTCACAGA TAAATGTGAT ATCTATAGTT TTGGAGTGAT TCTTGGGATT CTGGTAATTG GGAAGCTTCC TTCAGATGAG TTTTTTCAGC ATACCGACGA GATGAGTCTG ATAAAGTGGA TGAGGAACAT AATAACATCG GAAAATCCTA GCCTTGCGAT TGATCCGAAG TTGATGGACC AAGGATTCGA TGAACAGATG CTTCTGGTTC TGAAGATCGC CTGTTACTGT ACTTTGGATG ATCCAAAACA GAGGCCGAAC AGCAAAGATG TCAGGACTAT GTTGTCCCAG ATCAAGCACT AGTGTTTCAA CATGTATTGT TTGCTTCTAT GAATGTTTTC TAGATTCCTG TTGCATAAGA AATAACTGTG AACACAATCT TGGCAGAAAT TTGTAATGAA GACTGTATAA TTTAAATGGA TTTCAATTAT G 
Length2081
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14293831.. 14295917
Download Sequence
A.thaliana
AGI-codeAT2G31880.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summaryEncodes a putative leucine rich repeat transmembrane protein that is expressed in response to Pseudomonas syringae. Expression of SRRLK may be required for silencing via lsiRNAs. Regulates cell death and innate immunity.
Alias[EVR][SOBIR1][EVERSHED][SUPPRESSOR OF BIR1 1]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg489780 Leucine-rich repeat receptor-like protein kinase family protein
2.23607 Ahg480590 NAC domain containing protein 36
2.44949 Ahg492546 cysteine-rich RLK (RECEPTOR-like protein kinase) 10
2.82843 Ahg942007 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
2.82843 Ahg346169 chitinase, putative
3 Ahg924051 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
3.4641 Ahg485448 HOPZ-ACTIVATED RESISTANCE 1
4.24264 Ahg921441
4.3589 Ahg492487 WRKY family transcription factor
5.38516 Ahg930319 receptor like protein 38
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression