Detail


ID : Ahg481446

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|481446|fgenesh2_kg.4__506__AT4G05505.1
Sequence
ATGAAGACTC GTGGTGGAAA AGGCAAGAGA GGAAGGGGAT CGAAGATTCC CCCCCAAAAT CGACCCACTT CTTCCCAGCC TGTACGAGTT GAATCGAAGA CCTTGAATCG AAGACCTAGG GGTCTTCCCA GCCAGTACGA GTTCACGCCG GCGAATCGTC AAGCCCCACT TCAAGATTCT GAACAAGAGC CGATTGCACA ACCTCCAACG GGTCCAACCA TCAGGGACTA TCCTCCTCCG ACGCAACTTT TCCAGTCAGG CGAAGGATCT CCTCGCGGAT CTGGCTCGAC TCCATTTCGA GCATCCGGAT CGACTCAACC TAGATCTGGA GGATCTCGTC GGTTCAACGG GAAGCTTACA ATCAGTCTCC AGCGCCGGTT CAACGGGAAG CCTCCAATCA GTCTCCAGCG CCGGTTCAAC CGGAAGCCTC CAATCCTCCA CCTCGGCAGG CGTCAAATCC TCCACCTCGA GCCTCTGTAT CACATCACAG CTCTCAAGCT CAAAACTCAC ATGCGGAAGA AGATGAAGAT GAGGAAGCTG AGGCTGATTA TGAAAGGGAA TCAACTCTCC CTGAAGATTC GCTTGCTACT CTCCATGAGT TGCTTCTTCA GCCAGGACGT GAGAAGTTTA CAACGGTCAT CTCTCCCACA TTTGAGCCTG GAACCTATTG GTAAGCTGAG TAGATTAGGT TTAGGGTTAA TATTGAGTAA TGTGTGTGTG TATCTGCTAA GTAGATTAGG TGTGTATATG GTAAGCTGAG TATATTAGGT TTAGGGTTAA TATTGAGTAA TATGTGTGTG TATGGTAAGC TGAGTAGATT AGTATAAAGC TTGCTAATTG GTTTATGTAA TTGTAGGTTT GGTCACGACA ATGGTAAGCT GACCCGGAAG ATCACAAAGG TATTCACAAA CAAGTTTAAT GGGCCATATT ACAATTGGAG CTGTGTACCT ACTGAAAGAA GACACAAATA CTTCCTCGAA TTCGCGGTAA ATTAACTTCT ATTGTCTGTA TCCATTTGGT TTGGTTTGGT TGTTTGATCA CTAACATCAA ACTCTCCTCT TGTTTTGTAG AAAACACACA CATGGCATCC ATCACTGACC GGTGTAATTG AAGAGAAATT CTACAAAATA TGTCAGCTGC GTATGAAGGA CATGGTTTCT AAGGCTTGCT CAAAACGAGC CACTGAGAGA CCGCCATGGA TTGAGAAGAC ATTGTGGAAG GAAATGTGTG AGTATTGGGA CACAGAAGAA GCACTTGCCA AGAGTTCAAC CACATCAGCA GCTCGAATGT CTGACCGTAA TGGTCTTGGT CCTCACAAGC ATGTATCGGG GCCAAAGTCT TTCTTACAAA TCGAGCAAGA GATGGTAAGT TACATCAAGC ACTCTTGTTT ATTTACATAA TGGTTTTCCT TAAGAATTTG AATTTTTTTG TGAACAACAT TTCAGGAAAT TGAGCTGGGA AGACCACCTA CTATTGGTGA GATATTCATT AGGACTCATA CCAAAAAAGA TGGGAGTTTT GTTGATAGGA AGGCGCAGGA AATTCATGAG GCATATTTGA AGAACAAGGA AGCTAAGTTG GCTGCCCTTG TGAATGATGA AGGGTCTGAT GGTACATCCC GTCGATCAGA ACTATCTCAA GAGGAGGATG ATGAGATCTT CCTTCTGGTA ATGTTTTTTT ATTATTATCA CTTACTTCAT CTTTTAAGAA CTAATCCTCT TGTCTTTTTT TTTGCAGTCA ACTGTCACAA ACGAGAGAGG GGTATACTTC GGAATGGGAA GCTTAGGGAG GTACATCAAT GGGAAGCGGA AGCACCCAGG AAGCAGTTCT GCTTTCACTT CCTTGCAGTC ACAGCTTGAG GAAGCCAACC GCAAGATAGA AGAACAAGCG ACTCTCCAAG CACATCGGGA GGCAGAGGCA TTGCGGGTGA AAGCTGAGCA AGCAGAGATC AAGCGTGTTG CTAATGAGCA ACAAGCAGAG ATCAAACACT TGAGGATGGT GAAGAAGTAC TTGACCGAAA CTGACCCCAA GTTTCTCGCC TTTCTCGAGT CTGCT
Length2055
Protein Sequence
Protein Residue
Map Locationscaffold_4: 5000565.. 5002675
Download Sequence
A.thaliana
AGI-codeAT2G12420.1
Descriptiontransposable element gene
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.78233 Ahg487525 nodulin MtN21 /EamA-like transporter family protein
20.7846 Ahg359114 transposable element gene
21.587 Ahg901222 homeobox-3
23.4734 Ahg891276
28.6705 Ahg945462
30.4631 Ahg900119
39.95 Ahg481945 LOB domain-containing protein 13
42.4264 Ahg936571
45 Ahg921700 ENTH/VHS/GAT family protein
47.1593 Ahg359063 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression