| Annotation |
|---|
| Description | jgi|Araly1|483318|fgenesh2_kg.4__2378__AT2G42270.1 |
| Sequence |
ATGACGAATT TGGGTGGCGG TGGTGCGGAG GAGCAAGCCA GGTTGAAGCA ATATGGGTAT AAAGCCAATT CTAATCTGGT TCTTAACAGT GATGATCATC GTCGTGATAC TCATGAATCT TCTGGTGAAC CGGAGAGTCT CAGGGGGAGG ATTGATCCGA AATCCTTTGG AGATCGTGTT GTTAAGGGGA GGCCTCGTGA GTTAGATGAG AGGCTGAAAC AATCGAAGAA GAAGGAGCGT GAAGATGATA TGGTATCTAC TCAGGAGAGT AAAAGACCTC GTCTCAGGGA GGTGATTGTG CTTACTGATA CGGATGATGG TGTTTATCAG CCCAAGAGTA AGGAAACAAG GGCTGCTTTT GAGACTATGC TTAGTCTTAT TCAGCAGCAA TTGGGTGGGC AGCCTTTGAA TATTGTTTGT GGTGCGGCTG ATGAGATTTT GGCTGTTCTC AAGAACGAAT CCGTCAAAAA CCATGAAAAG AAGGTAGAGA TTGAGAAACT ATTAAATATT ATTCCTGATA AGGTTTTCAA TCAGTTTGTT ACCATTGGAA AACTGATTAC AGACTATCAA GAGGAGGGTG GTGATTCTTT AAGTGGTCAA GCTTGTGAGG ATGAAGGACT TGATTATGAT GTTGGTGTGG CACTTGAATT TGAAGAGGAT GATGAGGAGA GTGATCTTGA TATGGTCCAC GATGAAAAGG ATGAGGACGA TGAAGACGAT GTTGAGCCTA ACAAAACCAG AGGTGTCCAG GTGGGTATGA CAATAAACGG TGAGGATGCA AGACATGCAA AAGAGGATAT GAGTCTTAAT GTTCAGGATA TTGATGCTTA TTGGCTTCAG AGAAAGATAT CTCAAGAATA TGAGCAGAAG ATTGATGCAC AAGAGTGCCA GGAACTCGCA GAAGAGCTGC TTAAGATACT TGCTGAGGGT AGTGATAGGG ATGCTGAGAT CAAGCTGCTT GAGCACCTTC AGTTTGAAAA GTTCAGCCTT GTTAAATTTC TGTTGCAAAA CCGCCTTAAA GTTGTGTGGT GCACCCGTTT GGCTAGGGCA AGAGACCAAG AAGAGAGGAA TCAAATTGAG GAGGAGATGA CGGGGTCGGG CTCAGAGTTG GCAGCAATTG TGAAGGAGTT ACATGCCAAA AGAGCAACCG CCAAAGAAAG GGAAGAGAAA CGGGAGAAAG ATATCAAAGA TGAAGCCCGA CATCTTATGG ATGATGACTC TGATGGAGAC AGAGAAAGAG GCCTGAGAGA TGTTGATGAT ATAGATTTGG AGAATGGTTG GCTGAAGGGT CAGCGTCAGG TGCTGGACCT GGAGAGCCTT GCTTTTTATC AAGGTGGTTT CACGAGGGAG AATAACAAGT GTGAGCTTCC CGATCGCTCT TTCAGAATAT GTGGCAAGGA ATTTGATGAG GTTCATGTAC CGTGGGTTTC GAAAAAGTTT GATAGTAATG AAAAGCTTGT AAAAATTAGC GATTTGCCAG AGTGGGCCCA ACCAGCTTTT GGGGGAATGC AACAGTTGAA CAGGGTTCAG AGCAAAGTGT ACAGCACTGC TCTTTTTAAG GCCGAGAACA TTCTTCTTTG TGCTCCAACT GGTGCGGGGA AGACCAATGT TGCTGTGCTC ACCATACTGC ACCAGCTTGG ATTGAATATG AACCCAGATG GAACGTTTAA TCATGGGAAT TACAAAATTG TCTATGTTGC ACCAATGAAA GCCCTTGTTG CTGAGGTCGT GGATAGTCTA TCTCAACGGT TGAAGGATTA TGGAGTTACT GTGAAGGAAC TCAGTGGGGA TCAGTCCCTT ACTGGGCAAG AAATCAAAGA GACTCAGATA ATTGTTACAA CGCCAGAGAA GTGGGATATC ATCACCAGGA AATCTGGAGA TCGCACTTAT ACTCAGCTTG TGAGGCTCCT TATAATCGAC GAAATTCATC TTCTTCATGA TAATCGAGGG CCTGTGCTTG AAAGTATTGT CGCTAGGACT CTTAGGCAGA TTGAAACCAC AAAGGAGCAT ATTCGTCTGG TAGGTTTATC TGCAACACTG CCAAACTGTG ACGATGTAGC TTTATTTTTG CGGGTGGATC TTAAAAATGG GTTGTTTAAA TTTGACCGCA GCTACAGACC TGTGCCTCTC AGTCAGCAAT ATATAGGAGT TAATGTGAAA AAGCCGTTGC GGAGGTTCCA ATTGATGAAC GATATATGTT ATCAGAAAGT AGTGGCTGTT GCTGGAAAAC ACCAGGTCCT TATCTTTGTC CATTCGAGGA AGGAAACAGC AAAAACTGCA AGGGCGATAC GGGACACCGC TATGGCAAAT AATACCCTCA GCAGATTCTT GAAGGAAGAT AGTCAAAGTC GTGAAATTCT TCAGAGTTTG ACTGAACTTC TCAAGAATAG TGACCTGAAA GAGCTTCTGC CTTATGGTTT TGCAATTCAT CATGCCGGGT TGACAAGGAC TGATCGTGAG ATAGTTGAGA ATCAATTTCG CTTGGGGAAT TTGCAAGTGT TGATTTCCAC GGCAACTCTT GCCTGGGGTG TGAATTTGCC CGCACATACT GTCATTATCA AAGGAACCCA AGTATATAAT CCTGAGAGAG GGGCGTGGAT GGAGCTGAGT CCTTTAGATG TTATGCAGAT GATTGGTCGT GCCGGAAGAC CTCAGTATGA CCAACAGGGA GAGGGGATAA TAATCACTGG ATACAGCGAG CTACAGTATT ATCTTCGTTT GATGAATGAG CAACTGCCTA TTGAAAGCCA GTTTATTTCC AAACTTGCTG ATCAGCTCAA TGCTGAAATT GTGCTTGGAA CCATTCAGAA TGCTAGAGAA GCTTGCCGCT GGCTTGGCTA TACATATTTA TATGTCTGCA TGGTTCGGAA TCCGACACTG TATGGCGTAC CGCCTGATGC CCTTGCAAAA GACTTGCTAT TAGAGGAGAG AAGAGCTGAT CTGATACATT CTGCTGCTAC TATCTTGGAC AAGAACAACC TGATTAAGTA CGATAGGAAA AGTGGACACT TCCAGGTTAC CGATTTGGGA CGCATTGCTA GCTACTACTA CATAACCCAT GGGACAATAG CTGCATACAA TGAGAATCTG AAGCCAACAA TGAATGATAT AGAGCTTTGC CGTCTGTTCT CACTGAGTGA GGAGTTCAAG TATGTGACTG TTCGGCAAGA TGAGAAGATG GAACTGGCAA AGCTTTTGGA TCGTGTACCG ATTCCGGTAA AGGAAACACT AGAAGATCCT AGTGCAAAGA TCAACGTTTT GCTGCAAGTA TATATTTCAA AGCTAAAGCT CGAGGGTCTT TCTTTGACAT CTGACATGGT TTATATTACC CAGAGTGCTG GACGTCTGCT ACGAGCTATT TTTGAGATTG TGTTGAAGAG GGGGTGGGCT CAACTGTCTG AGAAAGCTCT CAACTTGTCT AAAATGGTAG GGAAGAGGAT GTGGAGTGTT CAGACACCCC TCTGGCAGTT TCCTGGAATT CCCAAGGAGA TTCTGATGAA GGTGGAGAAG AATAATCTGG TGTGGGAGAG GTACTATGAT CTATCTTCAC AGGAGCTAGG AGAGCTTATT CGTAATCCTA AGATGGGCAG ACCACTTCAC AAGCACATCC ATCAGTTCCC AAAACTGAAT CTTGCAGCAC ATGTTTTGCC GATTTCTCGT TCTGTTCTGC AGGTGAAACT TACGGTGACA CCTGATTTCC ACTGGGATGA CAAAGCACAT AAATATGTTG AACCGTTTTG GATAATTGTG GAAGACAATG ATGGTGAAAA GATCCTTCAT CATGAGTACT TTCTTTTGAA AAAGCAGTAT ATTGATGAGG ACCACACGTT GAACTTCACT GTGCCAATCT CTGAGCCAAT TCCCCCACAG TATTTCATTC GAGTGGTTTC AGACAAATGG CTTGACTCGC CGACTGTGTT ACCTGTATCT TTCAGGCATC TTATTCTTCC AGAAAAATAT CCACCACCTA CAGAGCTACT GGATTTGCAG CCCCTCCCGG TGATGGCCCT AAGGAATCCG TCTTATGAAA CTCTGTATCA GGATTTCAAG CATTTCAATC CAGTGCAGAC TCAGGTCTTT AGTGTTTTGT ATAACACAAG TGACAATGTA TTGGTTGCTG CTCCCACAGG AAGTGGGAAG ACTATATGTG CGGAGTTTGC TATATTAAGG AATCATCTTG AAGGACCTGA TTCTACAATG CGTGTTGTCT ATGTAGCACC TCTTGAGGCT ATTGCCAAGG AGCAGTTTCG TGATTGGGAG AAAAAGTTTG GAAAGGGGCT TGGTTTACGG GTTGTTGAGT TAACTGGGGA AACAGCGTTG GATCTTAAGC TGCTTGAGAA AGGTCAGATA ATCATAAGTA CTCCTGAGAA ATGGGACGAT TTATCCCGCA GGTGGAAACA GAGAAAATAT ATCCAGCAGG TTAGTTTGTT TATTGTTGAT GAGCTTCATT TAATTGGGGG TCAAGGTGGT CCAGTATTGG AGGTAATTGT CTCTAGAATG AGATATATTT CAAGTCATGT CGGGAATAAA ATCAGGATTG TTGCATTATC GACTTCCCTT GCAAATGCCA AAGATCTTGG GGAGTGGATT GGGGCCAGTT CATGTGGCTT TTTCAACTTC CCGCCTAATG TTCGTCCTGT CCCACTGGAG ATCCACATTC ATGGGGTGGA CATATTGAGT TTTGAAGCCA GGATGCAGGC GATGACTAAG CCAACATACA CTGCCATAGT CCATCATGCC AAGAACAAGA AACCAGCTAT CGTTTTTGTC CCGACCCGTA AACATGTCCA CCTTACTGCT GTGGATCTGA TAGCATACTC GCACATGGAC AACATGCAGA ACCCTCATTT CCTTTTAGGG AATCTGGAAG AATTAGAGCC TTTTGTTAAA CAAATCTGTG AGGAAACTCT GAAGGAAACT TTACGTCATG GTGTTGGGTA CTTGCATGAG GGTTTAAGCA GTCTGGATCA GGAGATTGTG ACACAGCTTT TTGAAGCTGG ACGGATTCAG GTATGTGTAA TGTCTAGTTC ATTGTGTTGG GGCACTCCAT TGAAGGCGCA TTTGGTTGTT GTAATGGGAA CACAATTCTA TGACGGACGG GAAAATTCTC ATTCGGATTA CCCGATCTCT GATCTGCTCC AGATGATGGG TCGTGGTAGC AGACCTCTGC TTGACAACAC TAGGAAGTGT GTGATCTTCT GTCACGCACC ACGTAAAGAG TATTACAAGA AATTTCTGTA TGAAGCCTTT CCGGTTGAGA GTCATCTCCA ACATTTCTTG CATGATAATT TCAATGCAGA AGTGGTTGCT AGAGTTATAG AGAACAAGCA AGATGTTGTT GATTATCTTA CCTGGAGCTT CATGTACAGG AGGCTTCCCC AAAACCCTAA CTACTACAAT CTCCTGGGAG TGAGCCACAG ACATTTATCT GATCACCTCT CAGAGCTAGT TGAAAACACT TTGTCTGATC TTGAAGTGAG TAAATGCATT GAAATAGAGA ATGAGTTGGA TCTCTCTCCT CTCAATCTTG GTATGATTGC TTCGTATTAT TACATAAATT ACACCACCAT TGAGCGATTC AGTTCTCTCT TGGCTTCCAA GACCAAGATG AAGGGTCTTC TTGAGATCTT GACTTCAGCT TCGGAGTATG ACTTGATTCC TATACGTCCT GGTGAAGAAG ACACAGTTCG GAGACTCATC AATCACCAGA GGTTCTCTTT TGAAAACCCA AAATGCGCAG ACCCTCGTGT GAAGACAAAC GCGCTTCTTC AGGCGCATTT CTCAAGGCAA AAAATCAGCG GTAACCTGGC AATGGATCAG CGTGAGGTCC TCTTATCTGC AACAAGACTT CTTCAAGCAA TGGTCGATGT GATATCGAGC AATGGCACTC TAGATCTTGC TATTTTAGCT ATGGAAGTAA GCCAGATGGT GACTCAAGGC ATGTGGGATC GAGACTCCAT GCTTCTGCAG CTTCCTCACT TCACAAAGGA CTTAGCGAAA AGGTGCCAAG AGAATCCGGG GAATAATATC GAAACCATAT TTGATCTTGT GGAAATGGAA GATGACAAAC GCCAAGAGCT TCTCCAAATG TCAGACGCAC ATCTTCTTGA CATTGCCAGA TTCTGCAACC GCTTCCCCAA CATTGACCTT ACATATGAGA TTGTGGGCAG CAACGAGGTA AGCCCTGGAA AAGATATCAC ATTGCAGGTA ATACTGGAGA GAGACGTGGA GGGAAGGACC GAGGTGGGAC CTGTGGACGC ACCAAGATAT CCCAAGACTA AAGAAGAAGG TTGGTGGCTA GTCGTTGGAG AAACCAAGAC GAACCAGTTG ATGGCCATCA AGAGAATCTC TCTGCAACGG AAGGCGAAGG TGAAGCTGGG GTCTGAACCA GGAGAGAAGT CGTATACACT CTACTTCATG TGCGATTCTT ACTTGGGTTG TGACCAGGAG TACTCTTTCA CTGTTGATGT CAAAGATTCT GATGCCGCAG ATCACATGGA AGAATGAATT CTGCATCGTA GCTGGAGTTT GTTGTTCCAG CATAACCAGG AGAGAAGTCG TATACGCACT ACTTCATGTG CGATTCTTAC TTGGGTTGTG ACCAGGAGTA CTCTTTCACT GTTGATGTCG AAGATTCTGA CGTTGCAGAT CACATGGAAG AATGATTTAT GTTTTCTGGT TAGTTTTCGC GTCTTTCTTT GTTCTTCTGG TCGCATTTAG CTACTGTAGT TGATCTTACA TTTGATTACT AGATTCTGCA TTGTAACTTG GATGTGAAAA AAGAAAGAAA AGAACAAATC GAGTACTATT TTATTGCTTA GGATGTTGTT GAAAGCAGAT GCTTTTTCCT CAAGAGCTTA CATAGACAAT TTGGT |
| Length | 6875 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | AT2G42270.1 |
| Description | U5 small nuclear ribonucleoprotein helicase |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.48683 |
Ahg340056 | Chaperone DnaJ-domain superfamily protein |
| 37.229 |
Ahg482979 | |
| 38.3406 |
Ahg495081 | Transducin/WD40 repeat-like superfamily protein |
| 38.8716 |
Ahg473661 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 43.7721 |
Ahg479304 | Transducin/WD40 repeat-like superfamily protein |
| 57.6888 |
Ahg939210 | GRIP-related ARF-binding domain-containing protein 1 |
| 59.6322 |
Ahg942978 | Transducin/WD40 repeat-like superfamily protein |
| 65.4064 |
Ahg491910 | casein kinase I-like 6 |
| 66.0908 |
Ahg951424 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 66.6108 |
Ahg470494 | Major facilitator superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|