Detail



ID : Ahg951424

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951424|scaffold_803311.1
Sequence
AATGGGCCGA TATGAGGTAG GCGATGATCG GAGAAAATGC GCCGGCGATG AGAAGAGATT ATATCGGCGG ATTGATCGGA TTTTTCAGCT TCTTTGCTAC CAAAACCTGT TCGCCGGAAT CTTCTATCCA TAGTCAGTTA AGGTTTCTCA GCATCACTTG CGACTCCGTA CGCATAACTT TCCCTCCGCT TCTCAGACAA TGCATGGACG AAAGATCGAT ATCAGCACTC AAGAAGATCC AAGCCCAGAT GCTGAAATCT GCTAATTCCG GCCGAACTTT CCGGACGCAC GCGAGTTTAA AGTGTGGCGA GATCGGTTAC GCACGCCAGA TGTTCGATGG AATGTCTGAG AGACATATCG TAACATGGAA CTCTCTTATT GCTTATTTCA TTGAGCACAG AAGAAGCAAG GAAGCTGCTG AGATGTATAG ATTGATGATC ACGAATAATG TTTTGCCAGA TGAGTACACG TTGTCCAGTG TTTTCAAGGC GTTTTCAGAT TTGAGTCTCT TGAGAAGGAG GCACAGAGGA GCCACGGACT TTTTAGTCGA TGATTCCTTG CGAGTTCTCA AGGGTTTCAG GTACCCAAAT CAGGTAACTT GGACGTCCCT TCTATCAGGG CTTGCCCAAA ACGGTAGAGA AGAGATGGCT CTAATCGAAT TTAGAAAAAT GATGCGCGGT TCAGTCAAAC CCAACTCTTT TACATTGTCA AGTGCTCTCA GGGGGTGTTC GAATCTCACA ATGTTTGAAC AAGGGCTCAT TGATTTATAT GGGAAAACGT GGATGCTCAG ACATGGCAAG GTTGGGTTTT TTGACAACTT GAGTGAAGTT GCTGTTATAT CTTTGAGCAC AATGGTCTAC AGTTATGCAC AGAACGGTTT TGGACGCAAA GCACTTGCGT TGTTTGAGAT AATGATAAAT CTTGGACTAC AGCCTAACGA TGTAACAGTC TTGAGCGTAC TCTTGGCTTG TAATAACTCT GGAGAGGAAG GTTGCGAATT CTTTGACTCC TTCAGAAAGG ATAAGATCAC TATTGAATTG GAATACAAGC GTGGCGAGAT CGGCAATGTC TCCGGAATCC CTGAGGAGCA TCTTTCCCGG AAGGTGATAA TATACTCACC TGCTAGAACA GCTACCCAGC AAGGATCTGG AAAACTTGGA AAATGGAAGA TAAACTTCGT CTCCACCTTA AAGTGGGAGA ATCCGTTGAT GGGGTGGACT TCTTCTACAG GTTTCGCTCC AGATGATACA GGGAAAACCC GGACAGACAG CTTAAACGTT TTGCCAACTG GCTATGGGTT CTCATCTGTC ATGAACGAGG TGAAAATGCT TTTTGTAGAT AAGGTTTATA TTACAAACGT TATTGGTAAC CATTTTTTTC TTCCCGTGTG TAAGCATTCG TGTCTTATTA GTCTTACTGT ATTTGACTTA TTGAGTTGAA GATACTTTGG TAGTTGGCT 
Length1459
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20754404.. 20757680
Download Sequence
A.thaliana
AGI-codeAT5G65570.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.9545 Ahg481833 pumilio 3
28.0891 Ahg925691 Arginyl-tRNA synthetase, class Ic
31.241 Ahg933809 Galactosyltransferase family protein
43.1161 Ahg350409 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
44.0908 Ahg943674 transducin family protein / WD-40 repeat family protein
44.1588 Ahg470629 Pentatricopeptide repeat (PPR) superfamily protein
45.793 Ahg471905 GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain
48.621 Ahg491858 Tesmin/TSO1-like CXC domain-containing protein
66.0908 Ahg483318 U5 small nuclear ribonucleoprotein helicase
67.082 Ahg312743 SU(VAR)3-9 homolog 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression