Detail



ID : Ahg483750

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|483750|fgenesh2_kg.4__2810__AT2G46050.1
Sequence
ATGTGCTTTA CATTCCTCCG ATCAACTCCG ATCTTCCTTC AGAACCATCA GAACCACTTA TCTTCCTTGC GAACCATTAG AACCCTTCCT TCTTCTTCTT CTTCACCTGT AGCTATATCC TCTGTATCGA AGTTATCTGC TAGCTTGGAT CATCTCTTTG ACGTGAAACA AAAACATGGG TTCATGGTAA AACAAGGGAC TTACAATTCT CTGTTTTTTC AAAACAAGCT CTTGCAAGCT TACACGAAAA TCAGAGAATT TGATGATGCA GATAAGCTCT TCGACGAAAT GCTTGTGAGA AATATTGTTA CTTGGAACAT ACTGATTCAC GGGGTCATTC ACCGAGACGG TGACACCAAC CACAGAGCTC ATCTAGGTTT TTGTTATTTG AGCCGGAGTC TTCTTAGTGA GGTGATTTTG GATCATGTGT CGTTCATCGG GTTGATACGG TTGTGTACTG ATTCGACCAA TGTGGAAGCT GGTAACCAAT TACACAGTCT GATAGTGAAA CAAGGTCTTG AATCGAATTG CTTTCTGAGT ACTAGTCTAG TTGATTTCTA TGGGAAATGT GGTCTCATTG GTGAAGCAAG ACAAGTTTTC GAGGCGGTTT TGGTTAGAGA TTTAGTGCTG TGGAACGCTT TAGTTTCGTC GTATGTTCTT AACGGTATGA TTGATGAAGC TTTTGGTTTA CTCAAGCTGA TGAGTTCTGA AAAAAACGGA TTCACGGGTG ATAATTTCAC TCTCTCGAGT CTTCTCAGTG CATGCGGGAT CAAACAAGGG AAGCAGATTC ATGCCATTGT CTTCAAACTG TCATATTTAT TCGACATTCC TGTGGCGACT GCATTGGTGA ATATGTATGC GAAGAGTAAC CATATGAGTG ATGCTCACAA ATGTTTTGAA TCGATGGTTG TGAGAAATAT AGTGTCTTGG AACGCGATGA TTGTAGGTTT TGGACAAAAT GGAGAAGGAA GAGAAGCTAT GCGACTTTTT GGTCAAATGC TCCGTGAAAA TCTTCAACCT GATGAACTTA CCTTTGCAAG TGTTCTATGT TCCTGCACGA AATTCTCTGC AATTTGGGAG ATTAAGCAAG TGCAAGCGAT GGTTACTAAA AAGGGCTCTG CAGAATTTTT GTCGGTGGCT AATTCTCTGA TAAGTTCTTA CTCCAGGACT GGAAATTTAT CTGAAGCACT TTTATGTTTT CATTCGATCC GAGAACCTGA TCTTGTTTCA TGGACTTCAG TGATAGGAGC TCTGGCTTCT CATGGATTCG CAGAAGAAAG CTTGCGAATA TTTGAAAGTA TGCTGCAGAA ACTTCAACCA GACAAGATCA CTTTTTTAGA GGTTTTGTCT GCTTGTAGCC ATGGAGGATT AGTTCAAGAA GGGCTTCGTT GCTTCAAACG AATGACTGAG GTTTACAAGA TAGAACCAGA GGAAGAACAC TACACTTGTC TGATCGATCT TCTTGGTCGA GCTGGTTTCA TCGACGAGGC TTTTGATGTG TTAAAGTCAA TGCCCACAGA ACCAAGCACA CATGCTTTGG CAGCTTTCAC AGGAGCATGT AACGTCCATG AGAAAATAGA ATCCATGAAA TGGGGTGCAA AGAAGCTTCT TGAAATTGAA CCAAGCAAAC CTGTGAACTA CTCCATCATG TCAAACGCTT ACGCCTCCGA AGGCCATTGG AATCAAGCGG CTCTACTGCG TAAAAAAGAG AGGAGAAACT GCTACAATCC CAAAACTCTA GGTTGCAGTT GGCTATAG 
Length1758
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21233767.. 21235512
Download Sequence
A.thaliana
AGI-codeAT2G46050.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.5227 Virus0706
20.5183 Ahg931146
34.9428 Ahg945133
46.5618 Ahg353031 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
50.448 Ahg947468 Protein with RING/U-box and TRAF-like domains
50.5272 Ahg922069
62.145 Ahg492315 Family of unknown function (DUF566)
63.6396 Ahg928754
65.7723 Ahg473310 Glycine-rich protein family
74.2159 Ahg893714 Disease resistance protein (TIR-NBS-LRR class) family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression