Detail


ID : Ahg484968

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|484968|fgenesh2_kg.5__960__AT3G45880.1
Sequence
GTCAATGGCT AAAGAGATAC AAAATTTATG GAGAGAAGTA AGAGAATTGA GCTTAGGAAC TAAAATCGAT CGTCTTGATT CACCACCGTC TCCGGTGAAG TTTCTCCGTG ACTACGTGTC TCAGAGCAAG CCGTGTGTAA TCTCCAACGC TATTTCTCAT TGGCCAGCTC TAAAACTCTG GTCAGATCCA GCCTACCTCG CCGGAGCTTT GTCAGATGAC TTTGTTTCAT TACATCTCAC TCCTAACGGC TGCGCAGACG CCGTCACCGG AGATAGAGAT CTTTGTTTCG CTTCGGCTCA TGTTGAGAAA GTTTCGTTCC CGGAGGCTCT TGAGGCTGTT CAATCGTCGT GTAAAGGACT AAAGGTTGGG TATTTACAAC AGCAGAATGA TTGTTTTAGA ACGGAGTATT CGACGGTTGC GTTAGACTGC GACGGTGAGA TTGCGTGGGC TACGGAGGCG TTTGGTTGTT CGCCGGAAGC TGTGAACCTT TGGATTGGTA CTGATGACTC CGTGACTTCA TTTCATAAAG ATCACTATGA GAATCTATAC GCTGTTGTTT CAGGGGAGAA ACATTTTATT CTTCTTCCTC CGACTGATGT ACACCGCCTC TATATCGAAC AATTTCCGGC GGCTAATTAC TCTTACCACC GAGATACTGA AGTGTTCAAG CTTGAGATTG AGGAGCCAGT GAGGCATGTA CCTTGGTCTA GTGTTGATCC ATACCCTTCG CCAGAGAAAG AAGCAAGTGA GAGATTGAAG TATCCGTTGT TCTTCAATGG CCCAAAGCCG TTTCATTGTA CCGTCAAGGC TGGCGAGATT CTTTACCTGC CAAGCATGTG GTTTCACCAT GTTAGTCAAA CCCCAGGAGA TGGTGGCTAT ACCATTGCGG TGAACTACTG GTATGACATG CAGTTCGACA TCAAGTATGC TTACTTCAAC TTCTTGCAAT CTTTATCATA CCAGTCATCT TCACTCAATC CAGTTCTGTC TTGGAGAGAA GACAAAGATT CAGAATCCAG TGATGCAGAG ATTGTTCCCT GAATTAATGG TGTATCTCTG AAGCCATTGT CTATAGAAAA CCTCTTGTGG ATGTGTTTGG TTCAATATGT TCTTTAGTTA AAATCAGATA AAAACTCTGG AACTGGCTCC ATGGTCAACT TCTTCTCGGG AGTCCCAAAC AGAACTTTGA AACCGCGAAG CTATCCAGAA AATCAAAGTA CATGTTGCTT GACTCCGACA TTCTTGGGTT AATGGATTGT CTTTCTTCAC CTGGAACCGA AGATCTATAC ACTTCTCTGG CCCAGGAATC AACTGACACA TGTGATTGCT ACTGGGGCTT ATGAGCTGCA AGTCCACATT ATGAAATCTG GTGTAAGACC GACCTTGCTG TTTCTCAACC GTCTTTTTGA TTTGTGTATC ACCTGGACAT CGCCCGCAAC ATATTGGATA AATTCTGTAC AGAGAGTTTC ATTCCTCGGC AATTGTTATT ATCAGCTGTA TTGATATGGA TGGTTACCAA AACGCCACTT CTTTCTTTGT GACTATGTTG AACACCATAA TGTGATGTGT TCTAAAAGCA TGCGCCATGA GTGCAGATTT AATATCAGGG AAGCAAGTTC ACTCCCTATG CCACAAATTA TGGGGCTAGA TTTTGGCAGC TGAGTGTTTG TGAATGCCAT AAAGCTCAGG TTTGAATCAA ATGGTTTGAT TCAAAGTGGG TTGGTTGATA TGTACGGGAA GGTGTTCAGA GCTATGGAGG GTCACATAAG TTTAACTGCT GGAGGCTATG GTTTCGAGTT ATATGCAGAG TGGGTTTCGC ATTGAGGACA TCAAGCCTGA TACTGAGACT CTGTTTAACA TTGATGTGTA TATGCATATA T
Length1881
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11692031.. 11694769
Download Sequence
A.thaliana
AGI-codeAT3G45880.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg481069 SKP1-like 4
9.48683 Ahg479840
19.5448 Ahg326855 Protein phosphatase 2C family protein
38.8844 Ahg496372 Pentatricopeptide repeat (PPR) superfamily protein
39.2428 Ahg330249
40.3733 Ahg936168
40.7308 Ahg932001
43.5316 Ahg933769 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
69.0652 Ahg495722 expansin A14
81.1419 Ahg494895 Glutamate receptor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression