Detail



ID : Ahg485136

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485136|fgenesh2_kg.5__1128__AT3G47740.1
Sequence
ATGGCGGATT CTGGTCCAGC CAGCTTCTTG ACGCGTGCCA ATGCTATACT TAGAAAAAAT TTAACTTATC AGAAACGGAA CATATGGAGC AATGTTCGAC TTATTATTAT CCCTTTCTAC CTCTGCATAG TTCTTGTTTT TGTTCAAGGT CTATTCGATT CACAAGTCAA TAACTCTGTA GATAACCAAT GTGGTTGTCA ATGCATTGAC AAACTCGGAG ACGGAAAATG CGAAATGATT TGTGGTTTAG AATACTCGAC TCGGGATCAA GGAGTCTTTT GTGCTATCCC AAAACCACAA CCATGGCCTC CTTTGATTCT AATTCCGCGT TCTCACGCTC GTGCTGTTGA TTCCAGTTTC ACTGACGAAT CGTGCAGACG AAAAAATTCT TGTCCTGTAA CTATACTTTT CACTGGGAAT AATCAATCTC TTGGAGAAAC TTTATCTAGA AATCTTCTAA GGAGATCTTT TACAATGACC TCCTCTGACC TCTTGTTTAG TTTAGCTAAT AATGTCTTGG CTACAACATT AAAGGCAAGT GCAACCAATT ATCTTGATTC AGGGATTGTC TCAAATCTTA GCATTTACAC CATCCAATCT CGGTGCCCTC CAAACTCGAA CTTTTCATTC TCTCTCGGAC AATCACCTCT CAATTTTACG AAAGAGATGA GATGTGTTCA AGGATTGAAT CTTTGGAGAA ACAGCTCCGT AGAGGTCAAT CATGAGATTT TCAAAGGTTA TAAGGAAGGG AATTCTGATG GGAAAATAAG TGAGATTGTT GCAGCATACG ATCTCTTGGA CACTGATAGG ACTAACTTCA ATGTGAATAT ATGGTACAAT GCAACGTACA AAGGTGAAGA AGGAAATCAG CGTTATAAGT TGGTCCGAGT TCCCCGCTTA GTCAATTTGG TGTCAAATGC TTATCTTCAG TATTTGCAAG GCCCTGGGAC AAAGATGTTA TTTGAGTTTG TTAAAGAAAT GCCTAAGCAA GAAACTAAAC TTCGTATAGA CATTGCATCT CTAATTGGTC CATTATTCTT CACATGGGTT ATTCTTCTTC TGCTACCTGT GATATTAAAC TCATTGGTGT ATGAGAAGCA GCAACATCTA AGAATTATAA TGAAAATGCA TGGCCTAGGA GATGGCCCTT ATTGGGTGAT TTCCTACGTC TATTTTCTCG CCCTATCCAC GTTATACATT ATATGCTTGA TGATATTTGG GTCAGCAATA GGACTAAAGT TCTTCCTGTT TAATGACTAT AGCTTCCAGT TCGGTTTCTA TTTTCTCTTC ATAAATCTGC AAATCTCCAT AGCCTTTCTA GTTTCCTCAG CATTTTCAAA GGTCGAGACA GCATCAGTTG TTGCTTACCT ATACGTGTTT GGATCTGGGC TCTTGGGCGG GTTCCTCTTC CGGTTTATGT TGGAAGGTTC ATCGTTTCCT AGAAGCTGGA TTTTTGTCAT GGAGTTGTAT CCCGGCTTCT CCTTATACCG CGGGTTGTAT GAGTTCGCCC AGAATGCTTA TCAAGGAAGC TTGAATGGGA AAGATGAGAT GAAGTGGAAA TATTTTAGTG ATAGTGAAAT GGATGAAGTT TCCTACATCA TTATCGTTGA GTGGTTTGTT GCACTCATTG CAGCATACTA TATCGATAAG ATATCTTCAT CGGGGAACAA CCCTTTGTTT TTCTTGAAAA ACAATAACCC TTTCAAGAAA TATCCTTCTC TACAAAAGCC TAGCTTGCAA AAACAGGTCT CAGCAGTTTC CGTAGAAATG GAGAAACTAG ATGTCGTTCA GGAGAGTGAA AAAGTTGAGC AAATGATGCT TGAGTCAAGC ACAAGCCATG CAATTGTATG TGATAAGCTA AGGAAGGTGT ATCCTGGTAG GGATGGGAAC CCGCCAAAAA AGGCAGTTCG AGGGTTATCT CTCACTGTGC CTTCAGGAGA GTGCTTTGGC ATGTTAGGGC CCAATGGTGC TGGCAAGACT ACTTTCATCA ATATTATGAC TGGGCTTGTG AAACCAACAT CTGGAGCAGC TTTTGTTCAA GGTTTTGATA TATGCAAGGA TATGGACAAA GTCTACACTA GCATGGGTGT ATGCCCGCAA CACGACTTGC TATGGGAAAC ACTGACAGGA AGGGAACATC TGCTGTTTTA CGGGAGACTT AAGAATCTCA AAGGCTCTGA TCTCAACCAA GCTGTGGAAG AGTCTCTTAA GAGTGCCAAC CTTCTCCACG GAGGAATTGC GGACAAACCT GCTGGGAAAT ATAGTGGGGG TATGAAAAGG CGGCTGAGTG TAGCCATTTC ACTTATCGGG AATCCTAAGG TGGTTTATAT GGATGAGCCA AGCACAGGAC TTGATCCATC CTCGAGAAAG AACCTGTGGA CTGTCATCAA GCACGCAAAA AAAAACACTG CGATAATCCT CACTACTCAT TCAATGGAAG AAGCAGAGTT TCTCTGCGAC CGACTGGGAA TTTTTGTTGA TGGAAGGTTA CAATGCATAG GGAACCCAAA AGAGCTTAAG GGAAGGTATG GTGGATTTTA TGTGTTGACG ATGACAACAA CATCAGAACA TGAGAAAGAT GTGGAGGTGT TGGTTCGAGA TGTTTCTCCA AATGCCAAGA AGATATATCA CATAGCAGGG ACACAGAAAT TTGAGATCCC AAAAGACGAA GTTCGGATCT CGGAAGTGTT TCAGGCGGTA GAGCAGGCGA AGAGCAATTT CAAGGTGTTT GCTTGGGGTC TTGCAGACAC AACTCTGGAA GATGTTTTCA TTAAGGTTGC TAGAACTGCT CAAGCCTTTA ATGTCTTCTC TTGA 
Length2814
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12770025.. 12800284
Download Sequence
A.thaliana
AGI-codeAT3G47740.1
DescriptionABC2 homolog 2
TAIR curator summarymember of ATH subfamily
Alias[ABCA3][ATATH2][ATH2][ATP-binding cassette A3][A. THALIANA ABC2 HOMOLOG 2][ABC2 homolog 2]
Gene coexpression
MR
MR Locus Description
22.891 Ahg901222 homeobox-3
31.1448 Ahg949069 transposable element gene
33.9411 Ahg932542 RNI-like superfamily protein
35.327 Ahg924832
41.9285 Ahg473024 Integrase-type DNA-binding superfamily protein
47.2864 Ahg950383 Auxin efflux carrier family protein
47.5079 Ahg942093
48.621 Ahg905090
50.892 Ahg483920 Signal transduction histidine kinase
51.9615 Ahg321134
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression