Detail



ID : Ahg473024

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473024|fgenesh2_kg.1__2978__AT1G28160.1
Sequence
ATGGAGTTCA ATGGTAATTT GAATGCCGGT TCTTCCTCTA GATCAAAAAA GAGTCATAGG CAAAAGCAGC AACAACCGCA ACCGCAACCA CACCAACATA TTGAAGAAAT AAAGTATGTA GGGGTGAGGA GGAGGCCATG GGGAAGATAC GCAGCTGAAA TAAGAAACCC GACTACGAAA GAGAGGTATT GGCTAGGTAC TTTTGACACA GCCGAAGAAG CTGCATTGGC CTATGATAGA GCTGCACGGT CCATAAGAGG CTTGACTGCT CGAACCAACT TTGTCTACTC CGATATGCCT CGTGGCTCCT CAGTAACTTC ATTTGTCTCT CCTGATGAAT CCCAACGTTT CATTTCCGAG ATATTCAACC CTCCAAGCCA ACTAGAAATT ATTAACAGCA GCAACAACAA CAATCTCTCT TCATCGACCA ACAACCAAAA CCAGAACTCT ATTGAGTTCT CATACAATGG GTGGCCTCAG GAGGCTGAAT GTGGTTATCA ATCTATAACC AGTAATGCTG AGCACTGTAA TCATGAGCTT CCACCTCTTC CTCCCAGTAC TTGTTTTGGA GCTGAACTGA GGATTCCGGA GACCGATAGC TATTGGAATG TTGCGCATGC AAGCATAGAC ACGTTTGCCT TCGAGTTTGA TGGCTTTGTG GATCAAAACA GTCTTGGTCA GAGTGGAACA GAAGGGTTTA ATTCTTTATC CTCCACATTC TTCTACC 
Length727
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11762929.. 11763682
Download Sequence
A.thaliana
AGI-codeAT1G28160.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.
Alias
Gene coexpression
MR
MR Locus Description
7.54983 Ahg348712
7.68115 Ahg351609 Protein of Unknown Function (DUF239)
7.74597 Ahg949069 transposable element gene
7.87401 Ahg316947 Pectin lyase-like superfamily protein
13.0767 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
14.2829 Ahg900119
15.6525 Ahg494865 Pectin lyase-like superfamily protein
18.9737 Ahg342972
19.799 Ahg950383 Auxin efflux carrier family protein
22.5832 Ahg489113 Plant protein of unknown function (DUF247)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression