Detail



ID : Ahg485931

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485931|fgenesh2_kg.5__1923__AT3G55100.1
Sequence
ATGCTGCAAA GAGACGCCGT GATCGATGTT GACGCAATTG AGATGCAGCG CGTTCCGTTT GTCCTCGCCT TCAACGACCT AACCTATAAC GTCACTCTTC AACAACGTTT TGGTCTTCGT TTCGGACATA GCCCTGCTAA GATAAAGACA CTGCTCAATG GTATCACTGG AGAGGCTAAC GAAGGAGAAA TCCTAGCCAT TCTTGGTGCA AGCGGAGCTG GAAAATCAAC GCTTATCGAT GCATTAGCAG GACAGATCGC GGAAGGTAGC TTGAAAGGCA CGGTTACTCT AAACGGAGAA GCTTTGCAAT CTCGTGTGTT GAGAGTTATA TCGGCTTATG TAATGCAAGA AGATCTACTT TTCCCTATGC TCACTGTCGA AGAAACCCTA ATGTTCGCTG CCGAATTTAG GCTTCCGCGA AGCTTTAGCA ATTCAAAGAA AAGAAACAGA GTTGAAACCC TTATAGATCA ATTAGGGCTC ACAACTGTTA AAAACACAGT GATCGGAGAT GAAGGCCATC GTGGTGTCTC CGGCGGAGAA AGAAGACGTG TATCAATTGG GACCGACATC ATTCACGATC CTATCATCTT GTTCTTCGAC GAACCAACCT CAGGACTAGA CTCAACTAGT GCCTTCATGG TGGTGCAAGT CTTGAAAAGG ATTGCACGTA GTGGCAGCAT CGTAATTATG TCAATTCATC AGCCTAGTGG TCGGATTATG GAGTTTCTTG ATCATATCAT CGTCTTATCT TCTGGCCAGA GCGTGTTTAG TGATTCTCCG GCTACTATCC CTTTGTTCTT CTCAGAATTT GGTAGTCCCA TACCGGATAA AGAAAACAAT GCGGAATTCA CACTTGACCT AATCAAAGAG CTTGAAGAAT CCTCCGAAGG AACAAGAGGG TTAGTCGAAT TCAACAAAAA TTGGCAACAA AAGAAGCTTA GAGTTAACCA AGAACCTCAC CATAGCTCAT CATCCTTGGG AGAAGCCATC AATGCAAGCA TTTCAAGAGG CAAACTTGTC ACTACTTCAT ATAGCTCTAT TCCTTCATAC GTAAATCCAT GGTGGGTCGA GACTGTAATC TTAGCTAAAC GCTACATGAT AAACTGGACC CGAACGCCCG AGCTTATCGG AACACGGGTT TTTATAGTCA TGATGACCGG TTTTCTCTTG GCTACTGTTT ACTGGAAAGT GGATGACTCT CCACGAGGCG TCCAAGAGCG GTTAAGCTTC TTCTCATTTG CAATGGCCAC AATGTTTTAC AGTTGCGCCG ATGGATTACC AGCTTTTATT CAAGAAAGAT ACATTTTCTT GAGAGAAACC GCGCATAACG CTTACCGAAG ATCCTCCTAC GTTATATCTC ACTCTCTCGT AACTCTGCCT CATCTCTTCG CGCTTTCCAT TGGATTTGCA GCCACCACAT TCTGGTTCGT TGGTCTAAAC GGCGGTCTCG CAGGTTTCAT CTACTATCTT CTGATCATCT TCGCGTCGTT CTGGTCTGGA TGCTCTTTCG TTACATTTGT CTCCGGTGTG ATTCCAAACG TGATGATGAG TTATATGGTT ACATTTGGCT ACCTCTCATA CTGCCTTCTC TTCAGCGGAT TCTACATCAA CCGCGATCGA ATCCATCTTT ATTGGATATG GATTCATTAC ATTTCTCTAC TAAAGTATCC CTACGAAGCT GTTCTGCACA ATGAATTTGA TGATCCTTCC CGTTGTTTCG TAAGAGGAAA CCAAGTTTTT GATAATACAA TAATCGAAGG AGTGTCTGAA ACGACAAAGG CTAAGCTTCT GGAGACAATG AGCAGTTACT TGGGGATGGA GTTAACGGAA TCAACGTGTT TGAGGACGGG CTCTGATTTG CTAAAGCAGC ATGGAATTGA ACAGCTGGAT AAATGGGGTT GCTTGTGGGT AACGTTAGCT TGGGGATTCT TCTTTAGGAT CTTGTTTTAT TTTTCTTTGT TGCTTGGAAG CAAGAATAAG AGGGCGTGAA CGTCATT 
Length1997
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16363191.. 16365187
Download Sequence
A.thaliana
AGI-codeAT3G55100.1
DescriptionABC-2 type transporter family protein
TAIR curator summary
Alias[ABCG17][ATP-binding cassette G17]
Gene coexpression
MR
MR Locus Description
12.8062 Ahg915127 xyloglucan endotransglucosylase/hydrolase 2
22.7156 Ahg471303
35.7211 Ahg948503
42.0833 Ahg358507
43.4396 Ahg487143 Protein kinase superfamily protein
56.285 Ahg917023
75.5778 Ahg493607 zinc ion binding
82.2922 Ahg937743 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression