Detail



ID : Ahg487095

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487095|fgenesh2_kg.6__229__AT5G03240.1
Sequence
TCTTTCTCTG ACTCTTCAAT CTCTCACAAA CCCTAAACGA TTCTCTCTTT CAAGATGCAA ATCTTTGTGA AAACACTCAC TGGCAAGACC ATCACTCTCG AGGTTGAGAG CTCTGACACC ATCGACAATG TTAAGGCAAA GATTCAGGAC AAGGAAGGCA TTCCTCCGGA CCAGCAGAGA TTAATCTTCG CCGGTAAACA GCTAGAAGAT GGTCGTACCT TGACCGATTA CAATATCCAG AAAGAATCAA CCCTCCACTT GGTTCTTCGT TTAAGAGGTG GTATGCAGAT CTTTGTCAAG ACTCTGACTG GCAAGACCAT TACTTTGGAA GTTGAGAGCT CTGACACTAT TGACAACGTC AAAGCAAAGA TTCAGGACAA AGAAGGAATC CCTCCGGACC AGCAGAGGCT TATCTTTGCC GGTAAGCAGC TTGAGGATGG AAGAACTCTT GCTGACTACA ACATCCAGAA GGAGTCGACA CTTCACCTTG TCCTTCGTCT TCGTGGTGGT ATGCAGATCT TTGTGAAGAC CCTCACTGGT AAAACAATTA CCCTCGAGGT TGAGAGTTCA GACACCATTG ATAATGTCAA AGCCAAGATC CAGGACAAGG AAGGAATTCC TCCGGACCAA CAGAGGCTTA TCTTTGCCGG TAAGCAGCTT GAGGACGGAA GAACTCTTGC TGACTACAAC ATCCAGAAAG AGTCTACTCT CCATTTGGTG CTTCGTCTCA GAGGTGGTAT GCAGATCTTT GTGAAGACCC TAACCGGCAA GACCATAACT TTGGAGGTGG AGAGCTCAGA CACAATTGAT AATGTCAAGG CTAAGATTCA GGACAAGGAA GGGATCCCAC CAGACCAACA GAGGCTCATC TTCGCTGGTA AACAGCTTGA GGATGGTCGG ACTTTAGCTG ATTACAACAT TCAGAAGGAA TCTACCCTTC ACCTTGTGTT GCGTCTGCGT GGTGGAAGCT TCTAAGCTTT TGTGATCTGA TCAAAAGTGG CGGTTCTCTG TGTCATGCAC TTGGGAGGTG ATGATGTGAT GTTCTTCACC TGGTGGAAAA ACTTGTCCCT TTAGTTGTTT TAAGTTTCAT CGTCTGCTTT TCTTGTATGT TCTTATTAAC TTTTGGTTGG GCTCGTAACG GGCCTTTGTC TTTCAACTTT CAATAATAAT CCAAGTGCAT TTTAAACA 
Length1188
Protein Sequence
Protein Residue
Map Locationscaffold_4: 14977272.. 14979170
Download Sequence
A.thaliana
AGI-codeAT5G03240.1
Descriptionpolyubiquitin 3
TAIR curator summaryencodes ubiquitin that is attached to proteins destined for degradation. UBQ3 is most homologous with UBQ4, and is expressed in higher levels in vegetative tissue but lower levels in flowers than UBQ4. UBQ3 encodes different number of ubiquitins in different ecotypes. UBQ3 transcript level is modulated by UV-B and light/dark treatments.
Alias[UBQ3][polyubiquitin 3]
Gene coexpression
MR
MR Locus Description
26.6833 Ahg938060
33.0454 Ahg334493
66.1665 Ahg890303
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression