Detail



ID : Ahg488157

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488157|fgenesh2_kg.6__1291__AT5G13380.1
Sequence
TAATGCTTAA CTTGCCTCCT CATCCCTGTC GGAAACTCAT CCTCAATTTC CGGCACACGA ACTTTCTGCC ACTTTATCAC ACCTTTTATC TGCAGCGAGA GAGAGGCCAG AGACAATCCA CTGCAGCCAG AGCAAAGACG ATAAAAAAGC AGCAATCATG TTGCCAAAGT TCGATCCAAC AAACCTATTA GCTACCATGT CTGTTCTTGA GGATGTGACG ACCAACGTAA ACAAAATTCA AGATTCTGTG TTGGAAGCAA TACTTTCACG TAATGCTCAG ACCGAGTACC TTAGAGGTTT CCTCAACGGT CAACTCGATA AGCAGAGCTT CAAGAAGAAC CTACCCATTG TGACCTACGA AGTTATTAAG CCTCATATCG ATCGTATCGC TAATGGAGAG CCGTCTGATC TCATTTGTGA TCGACACATC AGTCTTCTCT TGGCCACCAC GGGAACTTCA GGAGGTATTC CAAAGTTGAT TCCTCTGACA GCAGAGGAAT TGGAACAGAG GATATTGTTT GGATTTCTCT ATGCACCTCT AGTCTTCAAG CACATCGAAG GGCTTACTCA AGGCAAATCT CTCATGTTTT ATTTTGTGAC TCGAGAAAGC GAGACTGCCT CTGGATTGAT GGTCAGGTTT ATGATAACTT GTGTTTTGAA AAGCGTGAAC CCAACCAATT CGTTTCTTTG GGATCGAGTA CAAATAAGCC CGCATGCGAT TGCGATTTGT GAAGACACTA ATCAAGCCAT GTACTGCCAA TTGCTTTGTG GGCTTCTACA ACGCGAAAAT GTAGCTCGCC TAGGTGCACC CTATGCTTCT TCCTTTCTCA AAGTAATCAA GTTTTTGGAA GATCATTGGC ATGAGTTATG CTCAAACATA AGGACTGGCC GTCTCAGCGA CTGGATAACA GACGCCCAAT GTGTTTCAGG GATCAGTAAG TTCCTCACCG CTCCAAATCC GGACCTAGCG AACCTGATCG AACAAGAATG CAGTAAAACC TCATGGGAGG CAATATTGAG GAGACTATGG CCAAAAGCAA AATGTATAGA AGCCGTCATT ACCGGCACCA TGGCACAGTA CATTCCGTTG CTTGAATTTT ATGGTGGTGG TCTTCCTTTG GTTTCATCTT GGTATGGCAG CTCCGAATGT TTCATCGGTA TCAATCTCAA TCCTCTGTCT AAGCCTAGTG ATGTGTCGTA CACCATCATT CCAAGTATGG GGTATTTTGA GTTCATTGAG GTTGTGAAAG ACCGTCAAGA AGCTGGCCAT GTTCCCGCAG ACCCTGTGGT GGTCGATCTC GTCGATGTTA AAATTGGCCA TGATTATGAA CTTCTTGTCA CAACGTTTTC TGGTAAGTTT CTCTATAGGT ACCGTTTAGG AGATGTTTTA CGGGTGACTG GTTTTCACAA CAATGCGCCA CAGTTTTATT TCGTGGGAAG GCAGAAAGTT GTTCTGAGCA TCGACTTGAG CAAGACCTAC GAAGAAGACC TCCTCAAGGC CGTGAAAAAC GCGAGTCTCC TGCTCGAGCC ACATGACCTG ATGCTCATGG ATTTCACTAG CCGTGTGGAT CTTTCCTCGT TGCCCGGACA CTATGTGCTC TATTGGGAAC TCGGGAGCAA ATTCAAGAAC GCGAAGCTGT ACCCCAACTC CAATGTCTTG GAGGAATGTT GCTTAACCGT TGAGGAGTCT CTAGACTCTG TCTACAGAAA AGGACGAAAA AATGATAAGA TCATTGGACC ACTTGAGATT AAGGTTGTCA AACCTGGCGC TTTCGACGAG CTCATGAATT TCTTCTTGTC TCGAGGCTCT TCTGTGAGTC AGTACAAGAC ACCAAGGTCA GTGACACATG AAGGAGCCTT GAAGATACTA GAGTCGAAAG TTGCTTACAA GTTTCTTAGC CGGAAAAGTC CGTCGTGGGA GCTACATGAG CTACATTCCA GCCGTTAAAA CCGCCGTTAC AAA 
Length1963
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5195602.. 5198165
Download Sequence
A.thaliana
AGI-codeAT5G13380.1
DescriptionAuxin-responsive GH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.6095 Ahg939587 CYCLIN D7;1
24.3926 Ahg932077 chromatin remodeling 34
27.1293 Ahg943380
30.3974 Ahg936263 terpene synthase-like sequence-1,8-cineole
51.225 Ahg344912 Plant invertase/pectin methylesterase inhibitor superfamily protein
54.7905 Ahg887627
56.6039 Ahg943378
66.1362 Ahg947778
67.3498 Ahg928004 Cysteine-rich protein
70.278 Ahg947246
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression