Detail



ID : Ahg936263

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936263|scaffold_500454.1
Sequence
CTCAATCTTC TACTAAATCT ATGGCTATTT TTTACCAAAA TACTCTTACC CAGTATTTTC ATATTCGACG TCCTCACCGT TTCTTATGCA AGTCCATGAC CAAAACGACG CCGGATGCTA GTTCTGCTGA CCTCCGTCGA CGCTCCAGCA ACTATCAACC TTCACGAGAT GTGTTGAAGA AAAAAGTGAA GATGATGCTT GATGTTGTAA AGAAGAGCCG TCTCGAGCAA TTAGAGCTCA TGGATGATCT GCAAAAACTT TTTTCATATC ATTTTGAGCT ACAAATAAAT GATGACATAT TTTCATCTTA AAAATGGAAG AAATGTCAGG A 
Length331
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2348113.. 2348624
Download Sequence
A.thaliana
AGI-codeAT3G25830.1
Descriptionterpene synthase-like sequence-1,8-cineole
TAIR curator summaryEncodes the monoterpene 1,8-cineole synthase, atTPS-Cin. This polypeptide was also shown to synthesize other monoterpenes albeit in minor quantities. The same polypeptide is encoded at two different loci, the result of gene duplication: at3g25820 and at3g25830.
Alias[ATTPS-CIN][TPS-CIN][TPS-CIN][terpene synthase-like sequence-1,8-cineole]["terpene synthase-like sequence-1,8-cineole"]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg914817
8.12404 Ahg944949
8.3666 Ahg917093
10.583 Ahg919765
12.6491 Ahg946885
12.9615 Ahg938992
14.8324 Ahg947059
16.9706 Ahg887565
18.8944 Ahg492315 Family of unknown function (DUF566)
19.799 Ahg930517 small acidic protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression