Detail



ID : Ahg488760

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488760|fgenesh2_kg.6__1894__AT5G18740.1
Sequence
TCTAGAGAAG AAAGTTGTCT TCTTGAGTGT CTATTTTGTT TCACGATGGA TGACACTGTA AATGAGCTTC TAAGAAGGAA AAAAGCTGTC TTGAATCATC AAATCAGGAG TGATTTGGTT GTATCGAATC GTCAGGAAAA AGCTCAAGCT TTCTCCTTGA TACAACAGAA AGATGTCCCA ACTAAAAGTC CCGGCACAAA TTTCAGTGGA AAAGAATATT CTTTTGGTTT GAGTAATTGT ACAGTTAAGG TTGGTGAGAA GAGACAGTGG AACGAGTGTG ACGACATTTG CAGTACTGAG AATCGCAGCA AGTCTGAAGA TGCTGTTGTA AATCTAAGTA AAGACAGGAT TGTACACAGG AAAAGAAGAG TGTTCAGTGA TAATGGAGAT GCGGCGGAAG AGTTTGGAAG CGGAAAGCAA CTCACTGAGG TTGATTGTTC TAAAAACCCA ATGTCAAATG CCATAAACAC GAATCGGAAG ATGGATAGGA AACAAGATGC TCAAGTGAGA GCTGCAGTGG GGATCTCTGG AAATCTTGAG GTGGATCAAA ACTCTGGTTT ACGTGATTCA GGTTCAGGAG GTGCAGTACA ACAAAACATT TTTGGATGTG CTGGTTTGAA ATTTAACGAC TTTGATAAGC TGAGGGAAGA AGTAAACTTT GAAGTTGGGC AGACCTGGGC TGTTTATGAT ACAGTGGATG GGATGCCTAG ATTGTATGCT CAGATCAGAA AAGTTTCAGC TCCTTGTTTT GAGCTTAGGA TTACATATCT AGAGCCAGAT CCAAATGGTG AGAAAGAGCT CCAATGGTTT GAAGAAGACT TGCCTGTTTC TGTTGGTATG TTCAGGCTTG GGGAAAATAA GAGCACACAA GATCGTTTAA TATTTTCACA TGTTATTCAT TGCAATGAAC GAAGCAATAC TCTATGTTTC AGCGTCACTT GTCGTTTCAT CAAAACTTGT CATTTTAGTG TATCTCCTAG GAAAGGCGAG ACATGGGCGC TTTTCAAGAA CTGGGATATT AAGTGGTCTT CAGAGCCAGA TTCTCACCGC AAATATGAGT ATGAATTTGT CGAGATTCTG TCAGATTATT CTGATGAAGG TGGTGCATAT GTTGCATACT TGCATAAAGC AAAAGGGTTT GCTAGTGTGT TCTTCCGAAT GGGAACTGGT TATGAAGGCA TATTTCGTAT TTTACCTCAG AGTTTGTATC GGTTCTCCCA TAGGGTTCCT TCCTTCAAAC TGACTGAAAT TGAAGGAAAA GGTATGCCAA AAGATGCTTA CGAGCTGGAC AAAGCTGCAT TACCAGAAAC AATTGAAGAG ATCATCGTGC CTTCAAACTC TGAGACAAGG GGAAGTGGTT ATGATGATTT GCCTCTCTAC TATGGTAGGA TTCAGAAGAT AACTTTTACT CATGCATTTA AGCAGGACCC GGTAATTAAA CTACACATTG GTCGGCTAAA GGCTACCCGT TCCCCTAAGG ATGTTGTCGA CTGGGAAGAC GGACAAATGC CTGTTGGTTG TGGAACATTC TACTCAAGAA AAATAGTTCC TCAAACCTCC TTGGATGGCA TTGAATATAC CATTCTCCCC AAGATTGTTG AAATTCTTGA TGACACTTTG GACTATAAGG TCCAACTGCT GGAGTATGAA TCCGTTCATG ATGATGATGA TGATGATGAT GATGGAACTG GGAATAGGTT GTTCAGGGCA TGTACGGAGT ATACTTATAA CGAGGATGAA GGGTCGGAAC CAATATTTAC GATCCCAAAG TCGGAAAGGA TCAGATTCTC GAATAAGGTT CCTGCTTCGC GTGTAACCAA AGAGATGCTT GGAGAGTTAA AAGAGTTTTT AAGTGTTGAT TATAGGGCAA CACCTATAAA CGTCATACAC TGTTGA 
Length1896
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7473536.. 7474106
Download Sequence
A.thaliana
AGI-codeAT5G18740.1
DescriptionDomain of unknown function (DUF3444)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
58.9067 Ahg351608 Protein of Unknown Function (DUF239)
78.7655 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
79.975 Ahg315021 Polyketide cyclase/dehydrase and lipid transport superfamily protein
91.4221 Ahg907586
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression