| Annotation |
|---|
| Description | jgi|Araly1|490270|fgenesh2_kg.6__3404__AT4G05320.5 |
| Sequence |
CAAAGACCTC TTCTTCTTCA CAATTCAGTT TCCAATTTCT CAACAATCTT AAAACCATTC TCTCAACCGT GATCAAGATG CAGATCTTCG TTAAGACTCT CACCGGAAAG ACTATCACCC TTGAGGTGGA AAGCTCTGAC ACCATCGACA ACGTTAAGGC CAAGATCCAG GACAAGGAAG GCATTCCTCC GGATCAGCAG AGGTTGATCT TCGCCGGAAA GCAGTTGGAG GATGGCAGAA CCCTTGCTGA CTACAACATC CAGAAGGAGT CGACCCTTCA TCTTGTTCTC AGGCTTCGTG GTGGTATGCA GATTTTCGTC AAGACTTTGA CTGGAAAGAC TATCACTTTG GAGGTGGAGA GTTCTGACAC CATCGACAAC GTCAAAGCCA AGATCCAAGA CAAAGAGGGT ATCCCACCGG ACCAGCAGAG GTTGATCTTC GCCGGAAAGC AACTTGAAGA TGGCAGAACT TTGGCTGATT ACAACATTCA GAAGGAGTCT ACACTTCACT TGGTCTTGCG TCTGCGTGGA GGTATGCAGA TCTTCGTGAA GACTCTCACC GGAAAGACCA TCACCTTGGA GGTAGAGAGC TCTGATACCA TTGACAACGT GAAGGCCAAG ATCCAGGATA AGGAAGGCAT CCCTCCGGAC CAGCAGAGGT TGATCTTCGC CGGCAAGCAG CTGGAGGATG GCCGCACCTT GGCTGACTAC AACATCCAGA AGGAGTCGAC CCTTCACTTG GTCTTGCGTC TACGTGGTGG TATGCAGATC TTTGTCAAGA CTTTGACCGG TAAGACCATC ACCCTTGAAG TGGAGAGCTC AGACACCATT GACAATGTGA AGGCCAAGAT CCAGGACAAG AAGGTATCCC TCCGGACCAG CAGCGTCTCA TCTTCGCTGG AAAGCAGCTT GAGGATGGTC GTACTTTGGC CGACTACAAC ATCCAGAAGG AGTCGACCCT TCACTTGGTC CTTCGTCTCC GTGGTGGCTT TTAAAACTTG TCTC |
| Length | 1004 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 21983625.. 21985201 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G05320.2 |
| Description | polyubiquitin 10 |
| TAIR curator summary | One of five polyubiquitin genes in A. thaliana. These genes encode the highly conserved 76-amino acid protein ubiquitin that is covalently attached to substrate proteins targeting most for degradation. Polyubiquitin genes are characterized by the presence of tandem repeats of the 228 bp that encode a ubiquitin monomer. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid. |
| Alias | [UBI10][UBQ10][ubiquitin 10][polyubiquitin 10] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg490179 | polyubiquitin 10 |
| 2.23607 |
Ahg490155 | Ubiquitin family protein |
| 7.34847 |
Ahg937141 | Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain |
| 7.74597 |
Ahg895629 | ubiquitin 11 |
| 8 |
Ahg490677 | Papain family cysteine protease |
| 9 |
Ahg489474 | Major facilitator superfamily protein |
| 10.7238 |
Ahg922950 | thioredoxin H-type 5 |
| 15 |
Ahg944272 | Chaperone DnaJ-domain superfamily protein |
| 15.4919 |
Ahg934965 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 15.4919 |
Ahg488966 | ubiquitin 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
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| Growth Chamber expression |
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|