| Annotation |
|---|
| Description | jgi|Araly1|490677|fgenesh2_kg.7__110__AT4G39090.1 |
| Sequence |
CTATACATAC ACCTAGACAT TCACGTTACG TGTGAAATCA AATGGATCGT CTTAAGCTTT GTTTCTCCGT CTTCGTTTTG TTTTTCTTTC TCGTCTCCGT TTCGTCGTCT GATGTCAACG ACGGCGATGA TCTCGTGATC CGTCAGGTGG TTGGTGGAGC CGAGCCCCAG GTTTTGACCT CCGAGGATCA CTTTTCTCTG TTCAAGAGCA AGTTCGGGAA GGTGTACGCA TCCAACGAGG AGCATGACTA CAGATTCTCG GTTTTCAAGG CGAATCTGAG GCGAGCGAGG CGTCACCAGA AGTTGGATCC GTCGGCGCGT CATGGTGTAA CGCAGTTCTC AGATCTGACT CGGTCTGAGT TCCGGAAGAA GCATTTGGGG GTTAGAGGTG GCTTTAAGCT TCCTAAAGAT GCCAACAAGG CTCCGATTCT CCCTACCGAA AATCTCCCGG AGGACTTTGA TTGGAGAGAT CGTGGTGCTG TTACCCCCGT CAAGAATCAG GGATCTTGCG GCTCTTGCTG GAGTTTCAGC GCCACTGGAG CTTTGGAAGG TGCTAACTTC CTCGCTACCG GCAAACTCGT CAGCCTCAGC GAACAACAGC TCGTCGACTG TGATCACGAG TGTGATCCAG AGGAGGCAGG TTCCTGCGAC TCTGGTTGCA ATGGTGGGCT AATGAACAGC GCTTTTGAAT ACACCCTCAA AACCGGAGGC CTCATGAAAG AAGAAGACTA TCCTTACACC GGAAAGGACG GCAAGACCTG CAAGTTAGAC AAGTCCAAGA TCGTTGCCTC TGTCTCCAAC TTCAGTGTTA TCTCCATTGA TGAAGAACAG ATTGCTGCAA ATCTTGTCAA GAACGGTCCT CTTGCTGTAG CCATCAACGC TGGCTATATG CAGACTTACA TTGGAGGAGT CTCGTGCCCT TACATATGCA CCAGGAGGCT CAACCACGGT GTCTTATTGG TCGGTTATGG ATCCGCAGGT TACGCTCCAG CTAGGTTCAA GGAGAAGCCT TACTGGATCA TCAAGAACTC GTGGGGAGAG ACTTGGGGTG AGAATGGTTT CTACAAAATC TGCAAAGGCC GTAACATTTG TGGCGTTGAC AGTCTTGTCT CCACAGTTAC AGCCACCGTC TCAGCCACCG CCCATTAAGC ATCTCGTCAA TAAGTTTTAT TTACTTTGGT GATTTGTATG AGCGAGCTCT CTTTGCGCTG CTGACTCTCT ATTTATCTCT GCGTCTTGCT TGTAAATAAA ATGCATTCTA TTGAGCAAAA CCGTACAATG CTCGTTAG |
| Length | 1288 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 374135.. 375531 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G39090.1 |
| Description | Papain family cysteine protease |
| TAIR curator summary | Similar to cysteine proteinases, induced by desiccation but not abscisic acid. Required for RRS1-R mediated resistance against Ralstonia solanacearum. Interacts with the R. solanacearum type III effector PopP2. RD19 associates with PopP2 to form a nuclear complex that is required for activation of the RRS1-R–mediated resistance response. |
| Alias | [RD19][RD19A][RESPONSIVE TO DEHYDRATION 19][RESPONSIVE TO DEHYDRATION 19A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg486755 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| 2 |
Ahg476684 | bifunctional nuclease in basal defense response 1 |
| 2.23607 |
Ahg483215 | dehydration-induced protein (ERD15) |
| 3.4641 |
Ahg491400 | gamma vacuolar processing enzyme |
| 3.4641 |
Ahg489474 | Major facilitator superfamily protein |
| 4.24264 |
Ahg487757 | EXORDIUM like 4 |
| 4.58258 |
Ahg482337 | Dormancy/auxin associated family protein |
| 4.69042 |
Ahg934258 | A20/AN1-like zinc finger family protein |
| 5.2915 |
Ahg489182 | DNAJ heat shock N-terminal domain-containing protein |
| 6.16441 |
Ahg493908 | Domain of unknown function (DUF23) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|