| Annotation |
|---|
| Description | jgi|Araly1|491400|fgenesh2_kg.7__833__AT4G32940.1 |
| Sequence |
TCATTATATA AACAACGACA ACGTATGTGT TCTCCAATCA GATAAAAGAT TCAATTTTAT TTAATAGTCT GCCCGGCGAT AAAAAAAGAT TCCTATCAAC ATCATCATCA CTCGCCGGCT AATGGCCACA ACGATGACAC GTGTCGCCGT CGGCGTCTTC CTTCTTGCTC TCTTAGTCTC GCTGGTTGCC GTCTCCGCCG CGAGAAGCGG TCCTGATGAT GTTATCAAAC TCCCGTCGCA GGCTTCTCGC TTCTTCCGTC CTGCTCAAGA CGACGACGAT TCTAACTCCG GTACTAGGTG GGCTGTTCTA GTCGCCGGAT CTAGCGGATA TTGGAATTAC AGGCATCAGG CTGATATATG CCATGCTTAT CAACTTCTGA GGAAAGGTGG ACTGAAAGAG GAGAATATTG TGGTATTTAT GTATGATGAT ATTGCTAACA ATTACGAGAA TCCAAGGCCT GGAACCATTA TCAACAGCCC TCATGGGAAG GATGTCTATC AAGGAGTTCC CAAGGATTAT ATTGGAGATG ATGTTAATGT TGATAATCTA TTTGCTGTGA TCCTTGGAGA CAAAACTTCT GTTAAAGGGG GAAGTGGAAA GGTTGTGGAT AGTGGTCCTA ATGATCATAT CTTCATATTC TACAGTGACC ATGGTGGCCC TGGAGTTCTT GGGATGCCGA CTTCTCCTTA CCTATATGCA AATGATCTCA ATGATGTATT GAAGAAAAAA CATGCTTCAG GAACCTATAA AAGCTTGGTG TTTTATCTCG AAGCTTGTGA ATCTGGAAGT ATCTTTGAAG GGATTCTTCC AGAGGGTTTG AACATCTATG CCACAACTGC ATCAAACGCC GAAGAAAGCA GTTGGGGTAC CTATTGCCCT GGAGAGGAAC CTAGTCCTCC ACCGGAGTAT GAAACTTGTT TAGGTGACTT GTACAGTGTT GCTTGGATGG AAGATAGTGG TATGCACAAT TTACAGACTG AGACTCTGCA CCAGCAATAT GAACTTGTGA AAAGGAGGAC TGCACCTGTT GGGTACTCTT ATGGTTCTCA TGTCATGCAA TATGGCGATG TAGGACTTAG CAAGGATAAT CTCGATCTTT ATATGGGAAC AAACCCTGCC AATGACAATT TCACATTTGT GGATGCCAAT TCACTGAAGC CACCTTCAAG AGTTACAAAC CAGCGTGATG CAGATCTTGT CCATTTTTGG GAAAAGTACC GGAAAGCACC AGAAGGTTCC GCCAGGAAAA CAGAAGCTCA GAAGCAAGTA CTTGAAGCCA TGTCTCACAG ACTTCATGTT GACAATAGCG TGATACTCGT CGGAAAAATC TTGTTTGGCA TTTCGAAAGG TCCTGAAGTG CTAAACAAAG TACGGTCTGC TGGGCAACCG CTAGTCGATG ACTGGAACTG CCTTAAAAAT CTGGTGAGAG CTTTCGAGAG GCACTGTGGA TCGCTGTCTC AGTACGGTAT CAAGCACATG AGGTCCTTTG CAAACATCTG CAACGCAGGG ATCCGAACTG AGCAAATGGA GGAGGCAGCT TCACAGGCTT GTACCTCAAT CCCACCTGGT CCTTGGAGCT CGCTTCACCG TGGATTCAGT GCATAGAAAC CCTAAACACT CTTCGCATTT GTTTATACTA CCAAATCCCC AAATATTCCT ATTTCGATTT GTAATGATTA AATCATTATT CTCCCTGTAT ATCTCACTAT CATTTCCTAT GTATTTGATA TGTACAAATG CTTGTAGAAA CTAAAGTTGA ATGTATATTA CATGTAAATT TTTATATGTA AACTTGGGAG CTGTCAATCT TATGGATGGT TTACCTTTTG TAGCAGAAAC AGCAGAAGAA AATAGTAAAA |
| Length | 1860 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 3306371.. 3311830 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G32940.1 |
| Description | gamma vacuolar processing enzyme |
| TAIR curator summary | Encodes a vacuolar processing enzyme belonging to a novel group of cysteine proteinases that is expressed in vegetative organs and is upregulated in association with various types of cell death and under stressed conditions. They are essential in processing seed storage proteins and for mediating the susceptible response of toxin-induced cell death. |
| Alias | [GAMMA-VPE][GAMMAVPE][gamma vacuolar processing enzyme] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg488799 | Aluminium induced protein with YGL and LRDR motifs |
| 2 |
Ahg943129 | Copper amine oxidase family protein |
| 2.23607 |
Ahg947410 | glutamine synthase clone R1 |
| 3 |
Ahg490140 | allantoinase |
| 3 |
Ahg919779 | branched-chain amino acid transaminase 2 |
| 3.4641 |
Ahg490677 | Papain family cysteine protease |
| 4.58258 |
Ahg483215 | dehydration-induced protein (ERD15) |
| 5.47723 |
Ahg932721 | |
| 5.74456 |
Ahg481062 | stress enhanced protein 2 |
| 5.83095 |
Ahg496112 | myb domain protein 59 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|