| Annotation |
|---|
| Description | jgi|Araly1|492943|fgenesh2_kg.7__2376__AT4G19112.1 |
| Sequence |
AAATATTATT TTTCTAGCTG GGGAATATAA AATCGTAGGT TTTTTTTTTG GTCATCACGA GAGAACCGCA CATAGAAAAA AGCAAGGAAG AGAGATATTT GGCAGAGAGA GAAAACGGTG GATGAAGGAT TGATATTTGT TGGACTTTTG GATCGAAAAA TTGAAAGGTA AAGAGGTAGA GAAGCTCTGG ATTCCGTCTC TTCCCGTCGT CGGCGACGGT GGTTTTGCCC GTTGGCTCTG AGGTTCTATC AGGCTTTAAT TTAAGTGGAT TTTCTTCTTC TGAGATATGG AGCAAGTTTT TGTCTGGCCA AGCTGCTATC ACTATCGGCT TTTCTCATTC CAAGAAGCGC TCGATTGGCG GTTTCTTGTA CGTTCAGATT TCCTTGTGGG CTCTTTCGTT AACTGCACTT AGTGGTCAAA CCCTCTTCTA TGATCTTTAG AGGAAGGCGT GAGGCAAATT TCTGAGACAG GGCTGAAGTC TGCAAATTCT TCCTTTGCAT AGTCCTAGAG AAACCTCCTT GTTCCTCTCT TTCATATCTT GTTCTTATGG GTGCTGGTTG AAGAAAGATA CATCAGTTTT CTTTTTCAAG TTTACATATG TGGTTTCCTT GAGTCTGAAC CCCTGAGTGA GATGTTGTGA GCATAGGGTC CTTCCTATTA GCCAACACAT TCTTTCTTGT TGGTTCCTTG CGTCTTTGAG TTCTCAGTAT GTGTTTTCCT CTTCTCTTGC TGTCTTTCTT TTGCCTTAAT GGTCAACCCG TTTATGTGCA AAGTAAATAA CGGTCAGTCT ACCCAGCTGG AGAATCATTG ATTTTACTGC CTTGGTGTCA AGTACTTGCT ACGAACGACT GGAAGATTAA TGCTATATAA ATCTTTCAGA AGTTCTTTAC ATACAGAATA ATATAAAGAG GCTACTTTGC TTTACCGGAA AAACGATGGA CAGGTACAAG TTAATTAAAG AGGTTGGTGA TGGAACTTTT GGTAGTGTTT GGCGAGCTAT AAATAAGCAG ACGGGTGAAG TCGTTGCAAT TAAGAAAATG AAAAAGAAGT ACTACTCTTG GGACGAATGT ATTAATCTGA GAGAAGTGAA GTCGCTCAGG AGAATGAATC ATCCAAACAT CGTGAAGTTG AAGGAAGTCA TCCGGGAAAA TGATATCCTA TACTTTGTCT TTGAGTACAT GGAGTGCAAT CTTTACCAGC TTATGAAGGA TCGACAAAAG CTTTTTGCAG AAGCTGATAT CAGAAATTGG TGCTTTCAAG TCTTCCAAGG CCTTTCTTAC ATGCATCAGC GTGGTTACTT CCACCGCGAT CTTAAGCCAG AAAATCTGTT AGTCTCTAAA GACATCATTA AGATTGCTGA TTTTGGCCTG GCCCGGGAGG TTAATTCGAG TCCACCTTTT ACCGAGTATG TTTCTACACG CTGGTACAGG GCTCCTGAAG TACTCCTACA ATCATATGTA TACACATCAA AAGTTGATAT GTGGGCGATG GGAGCTATTA TGGCTGAGTT GTTGTCTCTT CGCCCAATTT TTCCTGGGGC TAGTGAAGCA GATGAAATCT ACAAAATCTG CAGTGTCATA GGCACCCCAA CTGAGGAGAC CTGGTTGGAG GGACTTAATC TTGCTAACAA TATAAACTAT CAATTCCCTC AGCTTCCTGG TGTACCTCTT TCAAGCTTGA TGCCATCTGC TAGTGAAGAT GCAATTAATC TTATTGAGCG GCTTTGCTCG TGGGATCCAT GCAGCAGACC GACTGCTGCT GAGGTGCTGC AGCATCCGTT CTTCCAGAGT TGCTTTTATG TCCCACCATC TCTTCGTCCC AAGCCTTCTG TTGCAAGAAC TCCTCCCGCC TGGGGATCAT TCGAGCACCA ATCAGTTAAA CGGCACCCGG TGTCTCTTGC CAATGCTAAG CCATTCAATA GCTATGTTTC CCCAAAATCA AATGCCGCTT TTGGCAGTGG CGTCCAGCGG AAACTCGAGA TGGCTAATCA AGATGGGACG AGAAACACTA AACCCGTGAG AAGTTCTGTC AGAGACTCCA AATACAGACC ACCCGGGAAA AAAAGTCCTC AAAAAGCAGC AGCAGCGTCA TTGAACAAGA ACCGGGTCAC GCGTAGTGTA TCCGAGACTG CTGATAAACT CGCAAACATG ACCATTGGAG CAACTGGATC TCGAAGACAC TCTGTATCCG TGGTTGGACA GCATCAACAG CTGAAACCAC CTGCGATGAA GGCAGGTTGG GTAGGAGAAA CACGTGACAT GTTCCTTAGA CCAACACAAC CCACCACCAA TGCCTACTCT AGGAAAGTCG CTGGATGACC CCTAAACAAA TAGTAACTCA AGCAAGCCTC TTCTGAGCAA ATATTTACTT TACAAACTCT CTTATTAAGT CTCAAATTCA TCAGAAAACA AGTGTCTCCT TTTCTTTTAT GACGCGTCTT TGCGCCGTCA ATAGTTCTGC TTTTGTTTTA TTTTCTTGAT TTTTGT |
| Length | 2486 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 9703662.. 9707836 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G19112.1 |
| Description | conserved peptide upstream open reading frame 25 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF25 represents a conserved upstream opening reading frame relative to major ORF AT4G19110.1 |
| Alias | [CPuORF25][conserved peptide upstream open reading frame 25] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg488835 | calcium-dependent protein kinase 19 |
| 26.9072 |
Ahg495173 | Clp ATPase |
| 39.3319 |
Ahg938862 | multiprotein bridging factor 1B |
| 41.5331 |
Ahg474538 | oligouridylate-binding protein 1A |
| 44.2719 |
Ahg492386 | ubiquitin-specific protease 16 |
| 45.6946 |
Ahg327370 | transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors |
| 46.2817 |
Ahg926235 | eukaryotic elongation factor 5A-3 |
| 46.422 |
Ahg355042 | pleckstrin homology (PH) domain-containing protein |
| 49.3559 |
Ahg925985 | DNA-binding HORMA family protein |
| 50.4381 |
Ahg311800 | Neutral/alkaline non-lysosomal ceramidase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|