Detail



ID : Ahg494807

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494807|fgenesh2_kg.8__623__AT5G42230.1
Sequence
ATGGCGGCTG TGTCGTTACG CAATGTGGTT GTGGTGATGG CAGTGGTGCT GGTGACTGTG CAGGTGTTTG CACAAGGGTA TCCGGAAGCA GATTTGGTTG TGAGGCTTCC AGGTCAACTA AAGGTTGCGT TCAGACAGTA CGCCGGGTAC GTTGATCTCG ACATGAATGC TGGGCGTAGC CTTTTCTACT ACTTCGTGGA GGCTGAAGAA CACCCTGACA CAAAACCGCT AACCTTGTGG CTCAATGGAG GTCCAGGTTG TTCTTCAGGT TGTGGAGGAG CTTTCACTGA GCTAGGTCCA TTTTACCCCA CAGGCGATGG CGGTGGTCTT CGCGTTAACT CCATGTCGTG GAACAAAGCA TCGAACCTGC TGTTTGTGGA GTCACCGGTT GGAGTTGGAT GGTCTTACTC CAACCGAAGC TCTGATTACA ACACCGGTGA CAAGTCTACT GCCAGCGATA TGCTCGTGTT CTTGTTGGGA TGGTTCGACA AGTTCCCAGA GTTCAAGTCT CGCGACTTCT TTCTCACTGG TGAAAACTAT GCAGGACATT ACATACCGCA ATTGGCTGAT GCGATACTCA GCTACAATTC ACGCTCAAGT GGGTTCAAAT TCAACATCAA AGGCATTGCA ATTGGGAATC CATTTCTGAA GCTTGACAGA GACGTCCGAG CTGCATTCGA GTTCTTCTGG TCGCACGGGA TGATCTCTGA TGAAGTGGGA CACACAATCA TGAGTCAGTG TGACTTCTTG GATTACACAT ATATATACCC GCATAACCTA AGTGTTGCAT GCAACGACGC TATCCGTGAA GCCGGAAACA GCATTACTGA GTATGTCAAC AACTATGATT TTCTCCTGGA CATTTGCTAC CCCTCGATTG TCCTGAAAGA ACTTAGGCTT AAGCAAATGG CCACAAAGAT GAGCATGGGA GTTGATGTCT GTATGACCTA CGAAAGACAG TTATATTTTA ATCTCCCAGA GGTACAGATG GCGCTTCATG CGAACCGCAC TCATCTGCCA TATTCATGGT CAATGTGCAG CAACCTGTTA AACTACTCTG GCATCGATGC AAACATCAAC ATGCTTCCGA CTCTGAAGAG AGTTATACAG AACAAAATTC CTGTTTGGAT CTTCAGTGGA GATCAAGATT CTGTAGTTCC ATTTCTGGGA ACACGAACTG TCGTAAGAGA ACTCGCCAAC GATCTCAATT TCAAGACGAC AGTTCCATAT GGAGTGTGGT TCCACAAAAG ACAGGTTGGA GGTTGGGCCA TCGAGTATGG AAACATACTC ACTTTTGCAA CAGTGAGAGG AGCGGCTCAT GCGGTGGCGA ACACGCAGCC CTCACAAGCT CTGCATCTAT TCAGCACCTT TCTTCGTGGC CATAGATTGC CCAACAAGAC AGATATAGCT ATGCATGATT GAAAGAGAAG GAAGCTCATT ATTAGAGTTT ATATCCTT 
Length1458
Protein Sequence
Protein Residue
Map Locationscaffold_8: 6444715.. 6446950
Download Sequence
A.thaliana
AGI-codeAT5G42230.1
Descriptionserine carboxypeptidase-like 41
TAIR curator summary
Alias[scpl41][serine carboxypeptidase-like 41]
Gene coexpression
MR
MR Locus Description
2.44949 Virus0941
15.1987 Ahg905519 CDPK-related kinase
15.2971 Ahg887750 F-box/RNI-like superfamily protein
26.8887 Ahg887561 Protein of Unknown Function (DUF239)
30.3974 Ahg914585
31.6228 Ahg949956
31.6228 Ahg928097
38.7298 Virus0087
38.7298 Virus1779
38.7298 Virus0532
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression