Detail


ID : Ahg494860

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494860|fgenesh2_kg.8__676__AT3G24080.2
Sequence
TAGCATAATG GGGCGGCCGA AAGCGATACC AGATGATGAC GACGGCGACG ACCTTTCACA GTTCACAGGC TTCGAGCTCG ATGAAAAATA CATGAAGAGA TTGGAGCACA ACAAGAACCG CGAGGCTCTC CAGCGACACG AGGAGCAGAA GAAGAAAGGT CTCATCGACG ATCCCGAGGA AGATTCTGAG CCTGAGTCTG AGCCGGATTC TGATCTCGGA AATCCAGAAA GCGATCTCAA ATTCGTTGAT TTGTTGCTTA AGGTAAAGAA AAAGGATCCT ATTATTAAGA ACAAAGATGC TAAGTTCTTT GAGTCTGATG AGAGTAGTGA AGAAGATGAG GTTGATGAGA AGGATAAGAA GAAGAAGAAG AAGAAGAAGA AGAAGAAGTT GTATTTGAAA GATGTTCAAG CACATCATTT GCTTGAGGAA GGTCCTGAGT TTGTTGAGGA AGATGAGGAG AGGAAGGTTA GGACTTACGC TGAGCAGCAG GGCGAGTTGA GGAGAGCTGT TACGGATGCT TTGGAAGCTG GAGGGAATGA GAGTGATGGA GATGATGATT TTTTGAGAGT TGTGGAGAAG GAAGGAGATG ATGATGTGGA GGTTGATCAG GAGTTAGCTA AGAAAATTGA TGAGTATTTT GGTGAAGAAG CTGAGGTTGT TGAGAATCAG TTTTTGAAAG ATTATTTGGT GAAACAATTG TGGAAGGAGA AAGAGGAGAA GATTATAGAT AAAGCAGAGT TGAAGGAGTT GAGTGAGGAT GAGCAAGCTG TTTGGGATCA GGAGGATTTT GAGGCAGGAA GACCGTTGGA GAGAAGCTAT AGGCATGAAG AGAATGCTGG AGACATTGTT ATGGGTCAGT CTAGGGTTGT GAAAGGGTCG GTGAGGAAGA AGGATAACGC GAGGAAGGAG TTGAAGCGAT TGAAGAATGT TAAGAAGAAG GAGATGAAGG AGAAGATGAA GAAGGTGCTT TATGTTGCTG GTTTTAAGGA TGGAGAAGAG TGTCCGTTAG ATGCGAAAGA TTTTGATGAT GAGTTTGATC CGGAGGAGTA TGATAAGATG ATGAAAGCTG CGTTTGATGA TAAGTATTAT GGTGCGGAGG ATTCGGATTT GAATAGTGAT GAGGATGATG ATGGAGAGAA ACCAGATTTT GACAAGGAAG ATGAATTGCT TGGACTTCCC AAAGATTGGG ATGTGACTAA AGGTGGGGAT GTTTTTACAG CCGCTAGAGA AAAGGGTTTG AAGCACAAGG GGAACGTTTT GGGGGATGAT GGAGAAGAAG AGGAAGAAGA AGAAAGATTA CTCTTGAGGG ACAAAAATGA ATATGTAAAA ACTATAAATT GCTACAAAAA TTGCTATAAT GATGAAGAAG AAGAAGAGGA ACAAGAAGAA GTAGATGAGG AGAATGAGGC AGAGGGTAAG AGGAAGAGAA AGCGAAAAAC GTCACTTGTA CAAAGAGCCA AAGAAGCTTT GATGGAGGAG TACTACAAGT TAGACTATGA GGATACAATT GGAGATTTGA AAACAAGGTT CAAGTATGCG AAAGTACAAC CAAACAGATT CGAACTGGAT ACAGGAGAGA TACTCACCTT AGATGACGCA GACCTGAACC AATATGTGCC GTTGAAGAAG ATGGCTCCTT ATGTGGAAAA GGATTGGGAG GTGAATAAGC ACAAGGTTAA GGAGCAGAAA CTTAAGATCA GGGAGTTGTG GGAGGGTAAA CACAATGAGA AGAAAAGCAA GAAGAGGAAG AAGACTGATG TTGCTGAGAC GAAACCAACA CCGAAAGCAG ATGAGGAAGG CGAGGCTGAG GCTGAGGCTG AGGCTGAGGC TGAGGCTGAG GCTAAACTAT CGAGAAAGGC GAAGAGAAGA AGGCGTCAAG CAGAGAAGAA GCTTCCTGCT AGCAGAATGG CTGCTTATGG GAAGGCATAA TAAAAAATCG AATTTACTCT TTTTATCTCC TAAAGTTAAT TAGATCATAG TGAGTTTCAG CTTTATCGTT TTCTACTATA AGATTCTAAG ATTATCAGTT TTGTTTCATT GTTCTTCAGT GTT
Length2053
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10723594.. 10725693
Download Sequence
A.thaliana
AGI-codeAT3G24080.1
DescriptionKRR1 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.225 Ahg344261
14.1067 Ahg471712 protein-protein interaction regulator family protein
17.1464 Ahg916256 KRR1 family protein
24.2487 Ahg316209 CCAAT-binding factor
29.3258 Ahg495573 DEA(D/H)-box RNA helicase family protein
30.9839 Ahg492970 Transducin/WD40 repeat-like superfamily protein
31.686 Ahg490186 Transducin/WD40 repeat-like superfamily protein
36 Ahg940041 DnaJ domain ;Myb-like DNA-binding domain
38.1576 Ahg494108 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
43.1509 Ahg476028 male gametophyte defective 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression