| Annotation |
|---|
| Description | jgi|Araly1|495665|fgenesh2_kg.8__1481__AT5G55840.1 |
| Sequence |
ATGGGTTTTG CTAAAGATTT GAAATTTTTG GGGGTCTATG AAACAGGATT TGATATGGAG AAGAGCATAT ATAACATTCT TACCATTGAC CGTTGGGGAT CTCTAAATCA TATGGACTAT AGGCAGGCTC GTCTTAGACC AGTTCATGGG AAGCTGGCTT TGAAGTTTCT TAAATGGGTA GTGAAACAGC CTGGTTTGGA TACTGACCAT ATTGTTCAGT TGTTCTGTAT TACTACACAT ATACTTGTTA GAGCGAGAAT GTATGACCCT GCAAGGCACA TCTTAAAGGA GTTATCTTTG ATGAGTGGTA AATCAAGCTT TGTTTTTGGT GCTTTGATGG CCACTTACCG GCTTTGCAAT TCAAACCCTT CGGTTTTCGA CATCTTGATT AGAGTATATT TGAGAGAAGG AATGATTCAA GATTCTCTGG AAATATTTCG CTTGATGGGT CTTTATGGAT TCAACCCGTC TGTATATACT TGTAATGCAA TACTAGGTTC CATTGTAAAG AGTTGTGAGG ATGTGTCAGT CTGGTCTTTC TTGAAGGAAA TGCTGAAAAG GAAGATTTGT CCTGATGTGG CTACCTTCAA TATACTAATT AATGTGCTCT GTGCTGAAGG AAGCTTCAAA AAGTCGTCTT ATCTAATGCA AAAGATGGAG AAGAGTGGTT ATGCGCCAAC TATAGTTACA TACAATACTG TGTTACATTG GTATTGTAAA AAGGGAAGAT TTAAAGCTGC TATTGAGCTT TTAGATCACA TGAATTTGAA GGGTGTCAAC GCTGATGTCT GTACATATAA TATATTTATC CATGATTTGT GCAGAAGCAA TAGAAGTGCC AAAGGTTATT TGTTGCTGAG GGATATGAGG AAGAGGATGA TTCACCCCAA TGAAGTCACG TACAATACAC TTCTTAACGG TTTTTCTAAT GAAGGAAAGG TGCTCATTGC TCGTCAACTT TTGAACGAGA TGTTAACCTT TGGACTTTCC CCGAGTCATG TTACTTTCAA TGCTTTGATT GATGGACACA TTAGTGAGGG AAACTTTAAA GAGGCTTTGA AGATGTTTCA TATGATGGAA GCAAAAGGTC TTATAGGTAC TGAAGTTAGC TATGGTGTAC TTTTAGATGG GTTGTGCAAG AATGCAGAGT TTGACCTAGC AAGAGGCTTT TACATGAGAA TGAAGAGAAA TGGGGTCTGT GTTGGGCGAA TAACATACAC TGGAATGATT GATGGGTTAT GCAAAAATGG GTTTTTGGAT GAAGCAGTTG TTATGCTTAA TGAAATGAGC AAAGATGGTA TTGATCCTGA TATTGTCACA TACTCTGCTC TTATAAATGG ATTTTGCAGG GTGGGGAGGT TGAAAACTGC TAAGGAGATA GTATGTAGAA TTTACCGAGT TGGTCTTAGT CCAAATGGCA TCATCTACTC AACCCTGATA TACAATTGTT GCAGGATGGG ATGCTTAAAG GAAGCAATAA GAATTTATGA AGCTATGATC CTTGAGGGCC ATACTCCAGA CCATTTCACG TTCAATGTAC TTGTTACTTC GCTGTGTAAA GCTGGTAAAG TGGCTGAGGC AGAAGAATTT ATGCGTTGCA TGACAAGTGA TGGTATTCTT CCTAACGCAG TTAGCTTTGA TTGTCTTATC AATGGGTATG GAAGCTCAGG TGAAGGGCTA AAAGCGTTCT CTGTATTTGA TGAGATGACC AAAGTAGGTC ATCACCCAAC GTTCTTCACA TATGGTAGCC TGCTCAAGGG ATTATGCAAA GGTGGGCATT TGATAGCCGC AGAGAAGTTT CTGAAAAGCC TCCAAAATGT CCCTGCAGCT GTTGATACTG TAATGTACAA CACACTAATC ACTGCTATGT GTAAATCAGG GAACTTGGAC AAGGCTGTCT CACTTTTTGG TGAGATGGTG CAGCGAAGCA TTCTGCCTGA CAGTTTTACT TATACCAGTC TTATATCTGG GTTATGTAGG AAGGGCAAGA CCGTTATTGC CATACTATTT GCTAAGGAAG CTGAGGCTCG AGGTAATTTA GTTCCCAACA AGGTGATGTA TACCTGTTTT GTGGATGGTA TGTTCAAGGC TGGCCAGTGG AAAGCTGGTT TTTACTTTCG GCAGCAAATG GATAAACTTG GCCTTACCCG TGATGTTGTC ACAACAAATG CAATGATTGA CGGTTACTCA AGGATGGGGA AAATAGAGAA GACACATGAC CTACTTTTTG AGATGGGGAA CCAAAATCAA GGTCCTAATC TAACTACCTA CAATATTCTT TTGCATGGGT ATTCAAAGAG GAAAGACGTA TCAACAAGCT TTATGCTGTA TAGATCCATG ATACTGAGCG GCATTTTACC TGACAAGCTC ACATGCCATT CTATTATTCT TGGGATTTGT GAATCCAACA TGTTGGAGAT TGGTCTTAAA ATCTTGAAAG CATTCATATG CCGAGGTGTT GAAGTTGACA GGCATACCTT TAACATGCTA ATCTCCAAGT GCTGTGCAAA TGGAGAGATC AACTGGGCAT TTGATATGGT TAATGTCATG ACCTCTCTGG GAATCTCCCT TGACAAAAAT ACTTGTGACG CCATTGTAAG TGTCCTCAAC AGGAACCACA GATTCCAGGA GTCTCGCATG GTTTTGCACG AAATGTCGAA GCAAGGGATA TCTCCCGAGA GTAGGAAATA CATTGGTCTG CTTAACGGTC TCTGTAGAGT GGGAGATATA AAGACTGCGT TTGTGGTGAA GGAAGAGATG ATAGCACATA AGATATGTCC GCCTAATGTA GCTGAGAGTG CAATGGTGAG AGCGCTTGCA AAATGCGGTA AGGCTGACGA AGCTTCGCTA CTTCTTCGGT CTATGCTGAA AATGAAGTTG GTTCCGACTA TTGCTAGTTT CACTACTCTA ATGCACTTGT TTTGCAAGAA CGGTAATGTT ACAGAGGCCC TGGAATTGAG AGTCGTCATG AGCAATTGTG GGCTGAAGCT TGATCTCGTG TCGTACAATG TATTGATTAC TGGACTTTGC GCCAAAGGTG ATATGGCAAT TGCATTTGAA CTCTTTGAAG AGATGAAACG AGATGGATTT TTAGCTAATG TGACTACTTA CAAAGCTCTC GTCGGTGGAA TACTTTCCCA AGGAACCGAA TTCTCTGGGA CTGATATCAT CTTGAAAGAT TTACTGGCAA GAGGATTCAT AACAGCCATG AGCTTTAATC ATATGATCAA CTTCCCTCAG CAAATTAGTG TTAACGCTTA TCTCAAGCAT CTGTTTCACT GTAGCACGAT GATATTGCCG TTTTATCACC GTGAAGAGCT GGATGTACAG AGTAATTTCT TGATCTTGTA CTGTTATACA GAACAAGACA AGCAGGACAG TGAAGCTGCA ACCTTACTGG CTCCTTTCTC TGACAAATAC AACTCAAAAA CTTCACCAAA GGAGACTGTG ATTGAATCTC TTAAACTTCC AGGTGGGTTT ATAAACGCTG TCTTTAACTC CACTTGCATT AAAGATCTTT GTTTCTTTAC AGAGACAAAG CAGGAGGATG AACAAGCTCT TAATAGCTGG AGCTGTGTTG TCATTTCATG TGCTGAATTC ACCTGTAATT AATCTGGACT GACCAAAGAT AATGGTTCAG GGAAAAATGA TGCAGAGCCA TGGAAGCAAA AAAAAAAAGC TTCTTCTGTG TCTTTGAAGA ATCTTTTTGA TGAATATGTC GGAACAACGA GAAACTAG |
| Length | 3738 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 16149226.. 16153318 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G55840.1 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.4641 |
Ahg470644 | Protein of unknown function DUF455 |
| 4.24264 |
Ahg332761 | ubiquitin-specific protease 17 |
| 41.5331 |
Ahg479588 | F-box family protein-related |
| 44.1588 |
Ahg939991 | Amino acid permease family protein |
| 47.5605 |
Ahg489304 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
| 59.8999 |
Ahg930806 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 61.9758 |
Ahg894625 | |
| 62.8888 |
Ahg338140 | MIF4G domain-containing protein |
| 69.857 |
Ahg492461 | RING/U-box superfamily protein |
| 71.6938 |
Ahg320039 | shikimate kinase 1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|