Detail



ID : Ahg495901

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495901|fgenesh2_kg.8__1717__AT5G57980.1
Sequence
ATGTCTGACT TGGATGATGA AATCACGAGG CTTTTCAAGG TGCGTCGCAC GGTGCTTCAG ATGCTGAGGG ATCGAGGTTA TACTATAGAA GAATCTGATT TGAACTTGAA AAGAGAAGAG TTTGTTCAGA GATTTTGTAA ACCTATGAAC AATATGAACA AAGTGAACAA AGAAGCTCTT TTCGTCGCTG CCAATAAGGG GCCAAATCCA GCCGACAAGA TTTATGTATT CTACCCGGAA GGCCCTAAGG TGGGAGTCCC AGTGATTAAG AAGGAAGTGG CAATAAAGAT GCGAGACGAT AAAGTTCCTC GAGGGATCGT AGTTGTTCCA ATGCCCATAA CTGGTCCAGC TAGAATGGCC ATATCAGAGC TTAACAAGAT TCTAACTATT GAAGTCTTTG AGGAAGCCGA ACTGGTGACC AACATCACTG AGCATAAACT CATCAACAAG TACTATGTAC TCGACGATCA AGCCAAGAAG GAATTACTCA AAACATACAC AGTTCAAGAC ACACAGTTGC CTCGCATCCT TGTCTCTGAT CCTCTTGCCA GATACTATGG ACTCAAGCGA GGACAAATTG TCAAGATCAG ACGAAGCGAC GTTACTTCTC TGGACTATTA TACCTACCGA TTTGCTGTTT GA 
Length642
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17271963.. 17272693
Download Sequence
A.thaliana
AGI-codeAT5G57980.1
DescriptionRNA polymerase II fifth largest subunit, C
TAIR curator summaryNRPB5-like protein of unknown function; homologous to budding yeast RPB5
Alias[RPB5C]["RNA polymerase II fifth largest subunit, C"]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg334861 ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases
6 Ahg353527
6.7082 Ahg357655
20.4939 Ahg895363
21.0238 Ahg347054
22.9129 Ahg921192 Plant thionin family protein
26.3059 Ahg888176
27.6586 Virus3933
27.6586 Ahg905846
38.3406 Ahg923524 ubiquitin-specific protease 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression