| Annotation |
|---|
| Description | jgi|Araly1|496807|fgenesh2_kg.8__2623__AT5G65700.1 |
| Sequence |
TCTCGACACT CACACCATCT CACAACCCTA ATCTCTCACA CACAAGAGAG AGAGATAGAG ATAAACAATG AAACTTTTTC TTCTCCTTCT TTTTCTTCTC CACATTTCTC ATACCTTCAC CACAAGCCGA CCAATCTCCG AGTTCCGTGC TCTTCTCTCA CTCAAATCCT CTCTCACCGG CGCCGGAGAT GACAAAAACT CGCCTCTCTC CTCCTGGAAA GTCTCAACTA GCTTCTGTAC ATGGACTGGT GTCACGTGCG ACGTCTCTCG CCGGCACGTG ACTTCTCTTG ATCTCTCTGG TCTTAACCTC TCCGGTACTC TTTCTCCAGA TGTTTCTCAT TTACGTCTTC TTCAGAATCT CTCGCTCGCT GAAAATCAGA TCTCCGGTCC GATTCCGCCG GAAATCTCGA GCCTTTCCGG TCTTCGTCAC TTAAATCTCT CAAACAATGC CTTCAACGGT TCGTTTCCCG ATGAGATTTC ATCTGGATTA GTGAATCTCC GAGTTCTTGA TGTCTACAAC AACAATCTAA CCGGAGATTT ACCTGTTTCC GTCACCAATC TGACTCAGCT CCGGCATCTT CACCTGGGTG GGAACTACTT CGCTGGAAAG ATCCCGCCTT CGTACGGAAG CTGGCCAGTT ATTGAGTACT TAGCTGTTTC CGGCAACGAG CTCGTCGGAA AAATCCCTCC AGAGATCGGA AACCTAAAGA CTCTCCGGGA GCTTTACATC GGCTACTACA ACGCTTTCGA AGACGGTCTT CCTCCAGAGA TCGGAAATTT ATCGGAGCTA GTCAGATTCG ACGCCGCTAA TTGCGGATTA ACCGGTGAGA TTCCGCCGGA GATCGGGAAG CTTCAGAAAC TCGATACGCT TTTCTTGCAA GTGAATGTCT TCTCCGGTCC GTTAACTTTG GAGCTAGGAA CGCTTTCGAG CTTGAAATCA ATGGATTTGT CTAACAACAT GTTCACCGGA GAGATTCCAG CGAGATTCGC AGAGTTGAAG AATCTCACGC TTTTGAATCT CTTCAGAAAC AAACTTCACG GCGAGATACC AGAGTTCATC GGAGAATTGC CGGAGCTTGA AGTGTTACAG CTTTGGGAGA ACAATTTCAC CGGAAGCATC CCGCAGAAAT TGGGGGAGAA CGGTAAACTC AATCTCGTCG ATCTCTCTTC CAACAAACTC ACCGGAACTT TACCGCCGAA CATGTGCTCC GGTAACAAGT TAGAAACTTT AATCACTCTT GGAAACTTTC TCTTTGGTTC AATCCCTGAT TCTCTTGGCA AATGTGAGTC TTTGACCCGG ATCCGAATGG GTGAGAATTT CCTAAACGGG TCAATCCCTC AAGGATTATT CGGATTACCC AAATTAACTC AAGTGGAGCT CCAAGATAAT TATCTCTCCG GAGAATTACC GGTTGCCGGA GGTGTCTCCG TCAATCTAGG TCAGATCAGT TTATCAAACA ATCAGCTCTC AGGTCCATTA CCTCCGGCGA TCGGAAACTT CACCGGCGTT CAGAAACTTC TTCTTGATGG AAACAAGTTC GAAGGTCCGA TTCCTTCGGA GGTAGGGAAG CTTCAGCAGC TCTCGAAGAT TGATTTCAGC CACAACTTGT TCTCCGGTCG AATCGCGCCG GAGATCAGCC GTTGCAAGCT CTTAACTTTT GTTGATCTGA GTAGAAACGA GCTCTCCGGT GAAATCCCAA ATGAGATCAC TGGTATGAAG ATACTGAATT ACTTGAATCT GTCGAGAAAC AATCTGGTTG GATCAATCCC TGGTTCGATC TCGTCAATGC AGAGCTTAAC ATCACTTGAT TTCTCTTACA ACAATCTCTC CGGTTTGGTT CCGGGCACTG GACAATTCAG TTACTTCAAC TACACATCGT TCTTGGGTAA TCCTGATCTC TGTGGTCCTT ATCTTGGTCC TTGTAAAGAC GGTGTTGCTA AAGGAGCTCA CCAGAGTCAT AGTAAAGGAC CTTTATCAGC TTCTATGAAG CTATTGCTCG TCCTTGGACT ACTCGTTTGT TCGATTGCAT TCGCGGTAGT AGCTATAATC AAAGCTAGAT CATTGAAAAA GGCGAGCGAG TCACGGGCTT GGAGGTTAAC AGCATTCCAG AGACTAGACT TCACATGTGA CGATGTCTTG GATTCTCTCA AAGAAGACAA CATTATAGGC AAAGGAGGAG CTGGTATTGT CTATAAAGGC GTAATGCCTA ATGGTGATCT AGTCGCGGTC AAAAGACTCG CTGCAATGTC CCGTGGATCT TCCCATGATC ACGGATTCAA CGCAGAGATT CAAACCTTAG GAAGGATAAG ACACAGACAC ATAGTGAGGC TTCTCGGTTT TTGCTCTAAC CACGAAACAA ATCTACTAGT CTATGAGTAC ATGCCTAATG GTAGTCTCGG TGAGGTGCTT CACGGTAAGA AAGGAGGACA CTTGCATTGG GACACACGTT ACAAGATTGC TCTTGAAGCT GCTAAAGGAC TCTGTTATCT TCATCACGAT TGTTCTCCAT TGATTGTTCA CAGAGATGTC AAATCAAACA ACATCCTCCT CGATTCAAAC TTTGAAGCTC ATGTTGCTGA CTTTGGTCTC GCTAAATTCC TTCAAGATTC CGGTACTTCT GAATGTATGT CTGCAATCGC TGGCTCTTAC GGCTACATAG CTCCAGAGTA TGCGTATACG TTGAAGGTAG ATGAGAAGAG CGATGTGTAT AGTTTCGGTG TGGTTCTTTT GGAACTCGTC ACCGGAAGAA AACCTGTCGG AGAATTTGGT GACGGTGTCG ACATTGTGCA ATGGGTTCGT AAAATGACTG ATTCGAACAA AGATTCGGTT CTGAAAGTAT TGGATCCGAG ACTTTCATCG ATTCCGATTC ATGAAGTGAC GCACGTCTTC TATGTCGCGA TGCTCTGTGT CGAAGAACAA GCTGTTGAGA GGCCGACTAT GAGGGAAGTT GTTCAGATTC TCACTGAGAT CCCGAAGTTG CCACCGTCGA AGGATCAGCC GACGACGGAA TCAACGCCGG AGAATGAGCT TTCGCCGAAG TCCGGTGCTC AAGGTCCGCC GGATCTACTC AATCTATGAG AGTTTTCCGA TTTCCGGCGG TTGATTTAGG GTACCGGTAT AAGGGGTAAA TTTGTCATTT TCATAAATGT TTTTAGCGTT AAGAGAGATT TGGTTGTTAA TTTTTGTGCT TTGGTCCGGT TTAGTATTGT TTTAACTCTT TTTAAGTGTG TTTTATTTTC CTCGGCTCTT TTTTTAATCG GTTATTCGGC TTTATTTAGT TTGTAATTTG TATTAATGAA AATGTACAGT TGATTTTTTT T |
| Length | 3321 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 20764553.. 20768033 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G65700.1 |
| Description | Leucine-rich receptor-like protein kinase family protein |
| TAIR curator summary | Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. |
| Alias | [BAM1][BARELY ANY MERISTEM 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.82843 |
Ahg479500 | cell elongation protein / DWARF1 / DIMINUTO (DIM) |
| 12.49 |
Ahg483863 | Pectinacetylesterase family protein |
| 14.7648 |
Ahg941476 | alpha/beta-Hydrolases superfamily protein |
| 15.0997 |
Ahg496451 | tubulin beta chain 2 |
| 15.748 |
Ahg485285 | IQ-domain 21 |
| 16.4924 |
Ahg488058 | Rho GTPase activation protein (RhoGAP) with PH domain |
| 20.664 |
Ahg938592 | Leucine-rich repeat protein kinase family protein |
| 22.0227 |
Ahg480117 | Auxin-responsive family protein |
| 22.4722 |
Ahg943148 | Cupredoxin superfamily protein |
| 23.0868 |
Ahg895488 | Ubiquitin-specific protease family C19-related protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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