Detail



ID : Ahg497456

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497456|fgenesh2_kg.482__1__AT5G42230.1
Sequence
ATGGCGGCTG TGTCGTTACG CAATGTGGTT GTGGTGATGG CAGTGGTGCT GGTGACTGTG CAGGTGTTTG CACAAGGGTA TCCGGAAGCA GATTTGGTTG TGAGGCTTCC AGGTCAACTA AAGGTTGCGT TCAGACAGTA CGCCGGGTAC GTTGATCTCG ACATGAATGC TGGGCGTAGC CTTTTCTACT ACTTCGTGGA GGCTGAAGAA CACCCTGACA CAAAACCGCT AACCTTGTGG CTCAATGGAG GTCCAGGTTG TTCTTCAGGT TGTGGAGGAG CTTTCACTGA GCTAGGTCCA TTTTACCCCA CAGGCGATGG CGGTGGTCTT CGCCATCGAA CCTGCTGTTT GTGGAGTGAC CGGTTGGAGT TGGATGGTCT TACTCCAACT GAAGCTCTGA TTACAACACC GGTGACAAGT CTACTGCCAG CGATATGCTC GTGTTCTTGT TGGGATGGTT CGACAAGTTC CCAGAGTTCA AGTCTCGCGA CTTCTTTCTC ACTGGTGAAA ACTATGCAGC TACAATTCAC GCTCAAGGGG GTTCAATTCA ACATCAAAGG CATTGCAATT GGGAATCCAT TTCTGAAGCT TGACAGAGAC GTCCGAGCTG CATTCGAGTT CTTCTGGTCG CACGGGATGA TCTCTGATGA AGTGGGACAC ACAATCATGA GTCAGTGTGA CTTCTTGGAT TACACATATA TATACCCGCA TAACCTAAGT GTTGCATGCA ACGACGCTAT CCGTGAAGCC GGAAACAGCA TTACTGAGTA TGTCAACAAC TATGATTTTC TCCTGGACAT TTGCTACCCC TCGATTGTCC TGAAAGAACT TAGGCTTAAG CAAATGGCCA CAAAGATGAG CATGGGAGTT GATGTCTGTA TGACCTACGA AAGACAGTTA TATTTTAATC TCCCAGAGGT ACAGATGGCG CTTCATGCGA ACCGCACTCA TCTGCCATAT TCATGGTCAA TGTGCAGCAA CCTGTTAAAC TACTCTGGCA TCGATGCAAA CATCAACATG CTTCCGACTC TGAAGAGAGT TATACAGAAC AAAATTCCTG TTTGGATCTT CAGTGGAGAT CAAGATTCTG TAGTTCCATT TCTGGGAACA CGAACTGTCG TAAGAGAACT CGCCAACGAT CTCAATTTCA AGACGACAGT TCCATATGGA GTGTGGTTCC ACAAAAGACA GGTTGGAGGC TGGGCCATCG ATTATGGAAA CATACTCACT TTTGCAACAG TGAGAGGAGC GGCTCATGCG GTGGCGAACA CGCAGCCCTC ACGAGCTCTG CATCTATTCA GCACCTTTCT TCGTGGCCAT AGATTGCCCA ACAAGACAGA TATAGCTATG CATGATTGAA AGAAAAGGAA GCTCATTATT AGAGTATATA 
Length1390
Protein Sequence
Protein Residue
Map Locationscaffold_8: 6444720.. 6446950
Download Sequence
A.thaliana
AGI-codeAT5G42230.1
Descriptionserine carboxypeptidase-like 41
TAIR curator summary
Alias[scpl41][serine carboxypeptidase-like 41]
Gene coexpression
MR
MR Locus Description
11.7473 Ahg472102 RING/U-box superfamily protein
28.6705 Ahg907286
29.0517 Ahg491864 Protein of unknown function (DUF626)
52.0769 Ahg487420 sucrose-proton symporter 7
80.1623 Ahg327864 Dehydrin family protein
83.4865 Ahg894540 protein kinase family protein
86.7871 Ahg926802
88.261 Ahg477951 GNS1/SUR4 membrane protein family
91.6515 Ahg932049 Basic-leucine zipper (bZIP) transcription factor family protein
95.8958 Ahg932913
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression