Detail


ID : Ahg887428

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887428|Al_scaffold_0693_1
Sequence
GCACATAACC AAGATGTGAA CTCTTTGGGA CTAATCTCAT CTCGCAAAAC TTCTGAAGCT GTTGATATTC TCAAGCTTAT GTCAACAACG TTCCTCGTTG CGATTTGTCA AGCTGTGGAT TTGAGACATT TGGAGGAGAA TCTGAAACAG ACTGTGAAGA ACACTGTTTC TCAAGTGGCC AAGAAAGTTC TTACTACTGG TGTCAATTTA CTCAAAGTCG TTGACCGTGA ACAAGTCTAC ACATATGCGG ATGATCCTTG TAGCGCAACG TACCCGTTGA TTCAGAAGCT AAGACAAGTT ATAGTTGATC ATGCTTTGAT CAATGGTGAG AGTGAGAAGA ATGCAGTGAC TTCAATCTTC CATAAGATTG GAGCTTTCGA GGAGGAGCTT AAAGCGGTGC TTCCGAAAGA AGTGGAGGCA GCAAGAGCGG CATACGACAA CGGAACATCA GCTATCCCGA ACAGGATCAA GGAATGTAGG TCGTATCCTT TGTATAGATT CGTGAGGGAG GAGCTTGGAA CAGAGCTTTT GACCGGAGAG AAAGTGACGT CGCCCGGAGA AGAGTTTGAT AAGGTGTTCA CGGCGATTTG TGAAGGTAAA ATCATTGATC CGATGTTGGA ATGTCTCAAC GAGTGGAACG GAGCTCCCAT TCCTATATGT TAA
Length663
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16773077.. 16773773
Download Sequence
A.thaliana
AGI-codeAT2G37040.1
DescriptionPHE ammonia lyase 1
TAIR curator summaryEncodes PAL1, a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).
Alias[ATPAL1][PAL1][PHE ammonia lyase 1]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg482690 PHE ammonia lyase 1
4.24264 Ahg485476 flavanone 3-hydroxylase
4.24264 Ahg945524 detoxifying efflux carrier 35
5.47723 Ahg481961 cinnamate-4-hydroxylase
6.48074 Ahg487319 Chalcone-flavanone isomerase family protein
7.74597 Ahg485933 Chalcone-flavanone isomerase family protein
8.94427 Ahg488219 Chalcone and stilbene synthase family protein
9.79796 Ahg326139 UDP-glucosyl transferase 78D2
12 Ahg905146 multidrug resistance-associated protein 6
12.7279 Ahg919812 Glutathione S-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression