Detail



ID : Ahg887862

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887862|Al_scaffold_0210_1
Sequence
ATGGGACCAA AGAAAGTAAC AAACCGTGGA GGGAGAAAAA AGAAGAAAGA TTCTGAAGAG CCAGAATTCT TGGGTACAAT AAACCCGCCA CAACCTGATC ATAACTTACA ACACAACCAG CGTCTAGAAG GAGTTCAGCC TTTAGAAGAG CAGGATCAGC ATCCTTCAGA AGAGCAGCCT GTAGAAGCTC AGCCTTTAGA AGAGCAGGAT CAGCATCCTT CAGAAGAGCA GCCTGTAGAA GCTCAGCCTT CAGAAGAGCA GGCTCAGCAT CCTTTAGAAG AGCAGCCTGT AGAAGATCAG CCAGGAGTTA ATGATGGGAC TGACGAGCAC GATCATGCCA GTAATAAGCC TTTGAAAGGT AAGAGGGAGC CTGAAGATGA TGTTGATACT AAAGTGAGTC TTAAGAAGCA GAAGGAAGAC GTGATTGCTG CTGTACAAAA GTACAAAGCT GTGAAGAAGG TGACTAAGAA GTTTGAGAGC TCCGACTCAT CAGACTCTGA ATCTGAGGAA GATGAGAAGG CTAAGAAAGT TCCAGCTAAG AAGGCTGCAG CCAAGAAGCA TGCTGCGGCT GCTGCTAAAA AGGCCAAGAA GGCTGCTGTT ACCAAGGCTG CAAGCAGTTC AGATTCATCT GATGAAGATT CTGATGAGGA AAGTGAAGAT ACTACTGAAT GTCTTCATGG TGCAATTGTT GTGGAGAAGA TGCGTAGGTG A 
Length711
Protein Sequence
Protein Residue
Map Locationscaffold_210: 540.. 5727
Download Sequence
A.thaliana
AGI-codeAT1G48920.1
Descriptionnucleolin like 1
TAIR curator summaryEncodes ATNUC-L1 (NUCLEOLIN LIKE 1), the predominant form of the two nucleolin proteins found in Arabidopsis. This protein is involved in rRNA processing, ribosome biosynthesis, and vascular pattern formation. PARL1 localizes to the nucleolus and parl1 mutants accumulate elevated levels of the unspliced 35S pre-rRNA. parl1 mutants also have defects in cotyledon, leaf, sepal, and petal vein patterning and have reduced stature, reduced fertility, increased bushiness, and reduced root length. The sugar-induced expression of ribosome proteins is also reduced in parl1 mutants.
Alias[ATNUC-L1][NUC-L1][PARL1][nucleolin like 1][PARALLEL 1]
Gene coexpression
MR
MR Locus Description
25.1794 Ahg906741
25.4558 Ahg949229
31.305 Virus0866
36.1663 Ahg952238 proline-rich family protein
36.7151 Ahg921882 Plant self-incompatibility protein S1 family
37.4967 Virus1014
38 Virus1615
39.598 Ahg916277 DNA-directed DNA polymerases
41.8091 Virus1370
42.8952 Ahg951580
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression