Detail



ID : Ahg887883

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887883|Al_scaffold_0041_1
Sequence
ATGAAAGACA CTGTTCAGGC TTCAGCTGCA GCCTTGGACC TAATCAAGAA CGAGCAAGTG AGCGCCATCA TCGGACCAAG AAACTCTATG CAAGCAGAGT TTATGATCAG ACTCGCCAAC AAAACTCAAG TACCAACCAT CACATTCTCT GCAACAAGTC CTCTTTTAAC ATCCATTAAA AGCGATTACT TCGTCCGAGC CACTATCGAT GACTCATACC AGGTCAAAGC CATTGCAGCC ATTTTTGAAT CCTTCGGATG GAGAAGTGTC GTCGCAATTT ATGTGGACAA CGAGTTAGGT GAAGGAATCA TGCCTTACTT GTTTGACGCT TTACAAGACG TGCAAGTCGA TAGAAGTGTG ATCTCCCCGG AGGCTAACGA TGACCAGATT CTAAAAGAAC TTTATAAGCT CATGACGAGG CAGACTAGGG TTTTCGTTGT CCACATGGCC TCACGTCTTG CTTCACGGAT TTTTGAGAAA GCTAAAGAGA TCGGGATGAT GGAGGAAGGG TATGTATGGT TAATGACCAA TGGAATGACG CATATGATGA GACATATCAA CCATGGTCGT AGCTTAAATA ATATAGAGGG CGTGTTAGGT GTGAGGAGCC ATGTCCCCCA ATCGAAAGAG CTCAAAGATT TCGGCTTGCG ATGGAATAAA AAGTTCGAAA AGGAGAATCC AACGATGAGA GATGATCTAA CCATTTTTGG ATTACGGGCG TATGATTCAA CCACTGCATT GGCCATGGCC GTGGAGAAAA CCAACATAAG AAGCTTTCCG TATGATAATG CGAGTGCGTC GTCAAATAAC ATGACAGATT TGGGGAACCT AGGTGTCTCT CGCTACGGTC AAAGTCTTTT AAATGCTCTC TCGGAAATAA GATTCAATGG TTTGGCAGGA GAGTTTAAAC TCATAGACAA GCAGCTCGAG TCACCAAAGT TTGAGATCAT AAATTTTGTA GGAAATGAAG AGAGGATTAT CGGATTTTGG ACACCGAGCA ATGGACTTGT GAATGCAAAT TCAAACAAAA CAACTTCATT TACAGGGGAG AGGTTTGACA TCTTTGAAGC TGCTCTTAAG AAGTTGCCAT ATTCAGTCAT TCCACAATAC TACCGTTTCG AGTCTCCCGA TGATCACTAC GATGACTTGG TCTACAAGCT CGACAACGGG ACTTTGGATG CAGTTGTTGG AGATGTAACT ATCACAGCGT ACAGGTCTTT GTATGCTGAC TTCACGTTAC CATACACAGA GTCAGGAGTG TCTATGATGG TGCCGGTGAG AGACAATGAG AATAAGAACA CATGGGTGTT CCTCAAACCT TGGACCTTAG AATTATGGGT CACCACTGGT TGTTTCTTCG TCCTCATTGG TTTTGTTGTG TGGTTGTTCG AACATAGAGT CAACACAGAC TTCCGTGGAC CGCCTCACCA CCAGATCGGC ACTAGTTTTT GGTTCTCTTT CTCCACCATG GTTTTTGCCC ACCGTGAGAA GGTAGTGAGC AACTTAGCAA GGTTTGTGGT GGTTGTGTGG TGCTTTGTGC TCAAGCCTTT TGGTTCTTCC GAAGAATGCG ACGCACTTTT GTCCAATGGC AGTATTTCAG TAGCTTTCGA CGAAATTGCC TACCTTAAGG CTATCCTTTC TCAATACTGC TCCAAATATG CCATGGTTGA ACCTACATTT AAGACTGCTG GTTTTGGCTT TGCATTCCCC AAGAATTCTC CTTTGACAGG AGATGTCTCA AGGGCTATCT TAAATGTGAC TCAAGGAGAT GAAATGCGAC ACATCGAGAA CAAATGGTTC ATGAGACAGA ATGATTGTCC TGATCCAAAG ACCGCTCTTT CGTCTAACCG TCTAAGCCTT AGCAGCTTTT CGGGTCTGTT TCTAATAGCA GGCATTGCTT CATTCTTGGC AGTACTCATC TTCGTTTCCC TTTTCTTGTA CGAAAATAGG CATACACTAT GTGAGGATTC CGAAGATTCG ATATGGGGTA CGCTAACGTC TTTATTCAGA AACTTCGATG AGAAAGACAT AAAGTCGCAT ACTTTCAAGA CCAGCGCTGT TCATAATGTG AGTTCACCTA TGACTCACTA CACTCCGAGC CCTTCAACTG TGCAAAGCCA ACCATGGCGA CATAGCCCGT CACAAAACAG GGGGTTTGAA CTAAGAAGAG TGTCTTTTAC CCCGAATGAA GAACGCTTAA CTACGGAAAC TATACATCAT GAAGATGAAG AATCTGATAT TGAATGTGGA GTTGAACAAT AG 
Length2262
Protein Sequence
Protein Residue
Map Locationscaffold_41: 3266.. 6736
Download Sequence
A.thaliana
AGI-codeAT2G29110.1
Descriptionglutamate receptor 2.8
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.8][GLR2.8][GLR2.8][glutamate receptor 2.8]
Gene coexpression
MR
MR Locus Description
15.748 Ahg472361 Protein kinase family protein
28.3019 Ahg312360 Protein of unknown function (DUF1262)
29.8998 Ahg475116 WRKY family transcription factor
29.9333 Ahg492497 cation/H+ exchanger 17
32.1248 Ahg493327 indole-3-acetate beta-D-glucosyltransferase
36.0832 Ahg491260 UDP-glucosyltransferase 73B2
44.5533 Ahg887884 glutamate receptor 2.7
48.9285 Ahg473476 Subtilase family protein
52.2494 Ahg909804 plant U-box 54
53.2916 Ahg934312 UDP-Glycosyltransferase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression