Detail



ID : Ahg891021

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891021|Al_scaffold_0007_3007
Sequence
ATGTTCTATA TGGGAAAGGA ACTTGAGGAT GAAAAGTCTC TTGCTGCACA AAATGTTCAA CCAAATTCCT TGGTTCATCT TATACGTAGT AAAGTACATA TGTGGCCATG GGCACAGAGG CTACCTGGCG AAAATAAATC TTTGAGACCT CATGGGGCAT TCAAAAAGAA ATCTGACTTA TCTACTAAAG ATGGCCATGT TTTCTTGATG GAGTACTGCG AGGAGAGGCT GCTGATGCTC AACAATGCAG GAATGGGTGC AAATTTGTGC ACATATTATC AGAAGTCATC CCCAGAGGAT CAACGTGGCA ACTGGCTGCA CAATCAAAGT GACACCTTAG GGAATGTGAT GATTCTAGAA CCTGGGGACA AGTGTCCTTT CCTTGGGGAG ATACATGTTG GTTGCAGTCA GTCATTTGTT GAAACAAACA TGTATAAAGC ACCTATTTTT CCACAGTGA 
Length459
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13980688.. 13981294
Download Sequence
A.thaliana
AGI-codeAT1G32750.1
DescriptionHAC13 protein (HAC13)
TAIR curator summaryThis gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation.
Alias[GTD1][HAC13][HAF01][HAF1][TAF1][HISTONE ACETYLTRANSFERASE OF THE CBP FAMILY 13][HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY 1][TBP-ASSOCIATED FACTOR 1]
Gene coexpression
MR
MR Locus Description
11.4018 Virus0447
11.4018 Virus0440
12.3288 Ahg950300
22.2261 Virus0604
32.5423 Ahg897250 Protein of unknown function (DUF626)
35.8887 Ahg951084
41.0244 Virus1227
42.4971 Ahg350576 Mitochondrial ribosomal protein L37
49.4166 Virus1212
49.94 Ahg906319 Protein of unknown function (DUF789)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression